Repositories list

• PALS

  Public
  Pipeline for Analysing Lesions after Stroke (PALS) is a scalable and user-friendly toolbox designed to facilitate standardised analysis and ensure quality in stroke research using T1-weighted MRIs

  anatomical-mribrain-extractionwhite-matter-segmentation+ 2freesurferlesion-correction

  Python

  •7•23•9•5•Updated Dec 3, 2024Dec 3, 2024

• ConfigGenerator

  Public
  HTML

  •1•0•0•0•Updated Nov 20, 2024Nov 20, 2024

• enigma-data-request-form

  Public
  TypeScript

  •0•0•0•0•Updated Nov 19, 2024Nov 19, 2024

• collaborators-directory

  Public
  TypeScript

  •0•0•0•0•Updated Nov 13, 2024Nov 13, 2024

• OT588

  Public
  Course materials for OT 588: Building Technologies that Promote Health and Well-Being

  GNU General Public License v3.0

  •0•0•0•0•Updated Aug 3, 2024Aug 3, 2024

• makerspace

  Public
  Healthtech makerspace

  HTML

  •0•0•0•0•Updated Oct 3, 2023Oct 3, 2023

• npnl.github.io

  Public
  HTML

  •0•0•0•0•Updated Sep 27, 2023Sep 27, 2023

• braindrles

  Public
  Its like Tinder, for Brains with Lesions!

  Vue

  •

  Apache License 2.0

  •14•0•3•0•Updated Mar 17, 2023Mar 17, 2023

• LeaderboardBackend

  Public
  Ruby

  •0•0•0•14•Updated Jan 19, 2023Jan 19, 2023

• OT699

  Public
  Course materials for OT 699: Building Technologies that Promote Health and Occupational Engagement

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Jan 9, 2023Jan 9, 2023

• LeaderboardUI

  Public
  JavaScript

  •0•0•0•26•Updated Jan 6, 2023Jan 6, 2023

• ATLAS

  Public
  A space to log issues, updates, and software related to the ATLAS (Anatomical Tracings of Lesions After Stroke) database.

  20•80•7•2•Updated Dec 12, 2022Dec 12, 2022

• github101

  Public
  A place to try out using github - feel free to practice making pull requests and more!

  0•0•0•0•Updated Dec 6, 2022Dec 6, 2022

• talks

  Public
  Slides and other resources from talks and webinars

  0•0•0•0•Updated Sep 27, 2022Sep 27, 2022

• isles_2022

  Public
  Example usage of BIDSIO for input + output for use with the ISLES 2022 Challenge

  Jupyter Notebook

  •3•12•0•0•Updated Sep 26, 2022Sep 26, 2022

• atlas2_type2_eval

  Public
  Type 2 Evaluation Docker

  Python

  •

  Apache License 2.0

  •0•0•0•0•Updated Aug 16, 2022Aug 16, 2022

• atlas_sample_docker

  Public
  Sample Docker for ISLES22

  Python

  •

  MIT License

  •2•0•0•0•Updated Aug 11, 2022Aug 11, 2022

• ramp_stroke

  Public
  Event kit for the RAMP framework.

  Python

  •0•0•0•0•Updated Jun 28, 2022Jun 28, 2022

• atlas2_grand_challenge

  Public
  Evaluation Docker for the ATLAS2.0 Grand Challenge

  Python

  •

  Apache License 2.0

  •3•3•1•0•Updated Jun 23, 2022Jun 23, 2022

• bidsio

  Public
  Python

  •

  Apache License 2.0

  •1•2•1•0•Updated May 2, 2022May 2, 2022

• StrokePreprocessingPipeline

  Public
  Code for running the preprocessing pipeline used for the ATLAS 2.0 dataset.

  Shell

  •

  GNU General Public License v3.0

  •0•2•0•0•Updated Dec 16, 2021Dec 16, 2021

• slides

  Public
  0•0•0•0•Updated Apr 13, 2021Apr 13, 2021

• REINVENT_data

  Public
  HTML

  •0•0•0•0•Updated Feb 6, 2021Feb 6, 2021

• ASNR_2019

  Public
  Materials for American Society for Neurorehabilitation Meeting - Symposium on Reliability and Reproducibility in Neurorehabilitation

  Jupyter Notebook

  •2•3•0•0•Updated Jun 25, 2020Jun 25, 2020

• Hippocampal_Segmentation

  Public
  HTML

  •1•1•0•0•Updated May 21, 2020May 21, 2020

• elsa

  Public
  evaluation of lesion segmentation algorithms for T1w stroke data

  HTML

  •3•2•0•0•Updated Mar 30, 2020Mar 30, 2020

• braindrles-deep

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Oct 10, 2019Oct 10, 2019

• braindrles-analysis

  Public
  Jupyter Notebook

  •0•0•0•0•Updated May 3, 2019May 3, 2019

• ScoreBackend

  Public
  The SCORE Assessment application consists of webforms to assist brain clinicians to assess brain stroke patients. The application consists of a backend written in Rails and the UI written using ReactJS.

  rubyruby-on-railsrails

  Ruby

  •0•0•0•0•Updated May 1, 2019May 1, 2019

• ScoreAssessmentWebForms

  Public
  react-routerreact-componentsreact-redux+ 1reactjs

  JavaScript

  •0•0•0•0•Updated Mar 8, 2019Mar 8, 2019