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@jyanglab The Yang Lab at University of Nebraska-Lincoln

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    31 repositories

    • jyanglab.github.io

      Public
      Yang Lab @unl website
      HTML
      •
      MIT License
      •16k•1•0•0•Updated Nov 10, 2024Nov 10, 2024

    • slides

      Public
      HTML
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Nov 10, 2024Nov 10, 2024

    • maize_sorghum_datasets

      Public
      Shell
      •
      GNU General Public License v3.0
      •6•1•0•0•Updated Jul 25, 2024Jul 25, 2024

    • fall2023workshop

      Public
      Yang Lab genomics workshop 2023
      HTML
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Sep 20, 2023Sep 20, 2023

    • Genetics-parameters-for-N-related-traits

      Public
      1•0•0•0•Updated Jan 24, 2023Jan 24, 2023

    • Workflow-for-Genome-wide-Mediation-Analysis

      Public
      bio-protocol
      R
      •5•4•0•0•Updated Jul 26, 2022Jul 26, 2022

    • GMA

      Public
      An R software package to conduct high dimensional Genome-wide Mediation Analysis (GMA)
      R
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Jul 21, 2022Jul 21, 2022

    • Maize_Rhizobiome_2022

      Public
      R
      •2•2•0•0•Updated Jun 2, 2022Jun 2, 2022

    • 2022-agro932-lab

      Public
      AGRO-932 lab materials
      C
      •
      GNU General Public License v2.0
      •10•1•0•0•Updated Apr 28, 2022Apr 28, 2022

    • GENIE3

      Public
      Machine learning-based approach for the inference of gene regulatory networks from expression data.
      C
      •34•0•0•0•Updated Sep 24, 2021Sep 24, 2021

    • UAV-based_HTP

      Public
      This is a research repository for a paper entitled "A UAV-based high-throughput phenotyping approach to assess time-series nitrogen responses and identify trait-associated genetic components in maize".
      HTML
      •0•1•0•0•Updated Sep 23, 2021Sep 23, 2021

    • huskeR

      Public
      An R packages to generate genomic and bioinformatic pipelines.
      HTML
      •1•0•0•0•Updated Aug 27, 2021Aug 27, 2021

    • agro931-project

      Public
      A demo project for class AGRO/ASCI-931: population genetics
      researchpopgenquantgenteaching
      HTML
      •
      GNU General Public License v3.0
      •0•2•0•0•Updated Nov 18, 2020Nov 18, 2020

    • msfs_teo

      Public
      mSFS using a teosinte natural population
      HTML
      •8•7•0•0•Updated Oct 15, 2020Oct 15, 2020

    • agro931-2020

      Public
      ANS/AGRO-931 lab for Fall 2020
      HTML
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Oct 4, 2020Oct 4, 2020

    • agro932-lab

      Public
      computational lab for AGRO-932
      HTML
      •
      GNU General Public License v3.0
      •12•0•0•4•Updated Apr 24, 2020Apr 24, 2020

    • impute4diallel

      Public
      SNP imputation for diallel hybrids from parental SNPs
      Python
      •0•2•0•0•Updated Dec 20, 2019Dec 20, 2019

    • labworkshop

      Public
      repo for lab workshop!
      HTML
      •0•1•0•0•Updated Jul 19, 2019Jul 19, 2019

    • JYang-Lab-tutorial

      Public
      J. Yang Lab tutorial for quantitative genetics and statistical genomics
      tutoriallab
      HTML
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jul 19, 2019Jul 19, 2019

    • fieldlayout

      Public
      An R package to layout the replicated field experiment
      R
      •0•0•0•0•Updated Apr 25, 2019Apr 25, 2019

    • seedbarcode

      Public
      A barcode Avery label generator for seed storage, planting, and storage
      PostScript
      •0•0•0•0•Updated Apr 24, 2018Apr 24, 2018

    • g3tools

      Public
      An R packages for Genomics, quantGen, and popGen studies, especially for crop species.
      packagegenomicspopgenblupquantgen
      R
      •1•5•1•0•Updated Apr 10, 2018Apr 10, 2018

    • statements

      Public
      Research Statements and Grants in Evolution/Ecology
      Other
      •127•0•0•0•Updated Aug 25, 2017Aug 25, 2017

    • methylome-mcmc

      Public
      R
      •0•0•0•0•Updated Aug 11, 2017Aug 11, 2017

    • brassica-QTL

      Public
      on-going project
      HTML
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jul 31, 2017Jul 31, 2017

    • GWAS-in-Crop-Species

      Public
      0•1•0•0•Updated May 9, 2017May 9, 2017

    • labwebsite

      Public
      Lab web site
      0•0•0•0•Updated Apr 21, 2017Apr 21, 2017

    • clockgene

      Public
      Clock genes
      gwasrna-seqresearch
      R
      •0•0•0•0•Updated Feb 1, 2017Feb 1, 2017

    • bd_cold

      Public
      R
      •
      MIT License
      •0•0•0•0•Updated Jan 8, 2017Jan 8, 2017

    • labdoc

      Public
      Lab Documentations
      0•0•0•0•Updated Dec 15, 2016Dec 15, 2016