Repositories list

• ppx-plots

  Public
  Plots of Pathoplexus data

  HTML

  •0•0•0•0•Updated Mar 9, 2025Mar 9, 2025

• covariants

  Public
  Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.

  trackingvariantsnextstrain+ 6covid-19covid19sars-cov-2sarscov2mutationmutation-distribution

  Python

  •

  GNU Affero General Public License v3.0

  •111•320•76•16•Updated Mar 7, 2025Mar 7, 2025

• template_nextstrain

  Public template
  Template for building your own Nextstrain workflow

  Python

  •1•0•0•0•Updated Mar 6, 2025Mar 6, 2025

• coxsackievirus_a16

  Public
  Python

  •0•0•0•0•Updated Mar 5, 2025Mar 5, 2025

• coxsackievirus_a6

  Public
  Code for Coxsackievirus A6 build on nextstrain.org

  Python

  •0•0•0•0•Updated Mar 5, 2025Mar 5, 2025

• enterovirus_a71

  Public
  Code to EV-A71 build on nextstrain.org

  Python

  •0•0•0•0•Updated Mar 5, 2025Mar 5, 2025

• nextclade_d68

  Public
  Python

  •0•0•0•0•Updated Mar 4, 2025Mar 4, 2025

• poliovirus_recombination

  Public
  Phylogenetics and recombination analysis of Enterovirus C with a focus on vaccine-derived polioviruses

  Python

  •0•0•0•0•Updated Feb 24, 2025Feb 24, 2025

• hodcroftlab

  Public
  Website for hodcroft lab

  HTML

  •0•0•0•0•Updated Jan 5, 2025Jan 5, 2025

• evd68_demo

  Public
  Demo files for EVD68 build

  0•0•0•0•Updated May 2, 2024May 2, 2024