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@Yemini-Lab Yemini Lab @ UMass Chan Medical School

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    7 repositories

    • NeuroPAL_ID

      Public
      Research software for (semi-) automated detection and identification of neurons in images of NeuroPAL, extract ID’d neural activity traces from NeuroPAL;GCaMP animals, and upload these datasets to public repositories. DOI: 10.1016/j.cell.2020.12.012
      matlabneuroscienceelegans
      HTML
      •
      Other
      •4•5•0•0•Updated Dec 11, 2024Dec 11, 2024

    • dev_tools

      Public
      Miscellaneous developer tools.
      Jupyter Notebook
      •0•0•0•0•Updated Nov 21, 2024Nov 21, 2024

    • nwb-build

      Public
      Jupyter Notebook
      •0•0•0•0•Updated May 13, 2024May 13, 2024

    • zephir-kiosk

      Public
      Minimal electron browser for embedding in NeuroPAL_ID.
      JavaScript
      •0•0•0•0•Updated Sep 13, 2023Sep 13, 2023

    • WT2

      Public
      Worm Tracker 2.0 Code (Yemini E, et al 2013 Nature Methods) -- PMCID: PMC3962822 DOI: 10.1038/nmeth.2560
      MATLAB
      •
      Other
      •0•2•0•0•Updated Sep 21, 2022Sep 21, 2022

    • Optimal_Coloring

      Public
      MATLAB
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      Other
      •0•0•0•0•Updated Sep 21, 2022Sep 21, 2022

    • dNMF

      Public
      Python
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      Other
      •0•0•0•0•Updated Sep 21, 2022Sep 21, 2022