Tissue Image Analytics (TIA) Centre

All

16 repositories

tiatoolbox
Public
Computational Pathology Toolbox developed by TIA Centre, University of Warwick.
python machine-learning deep-learning image-analysis cell-segmentation digital-pathology whole-slide-imaging medical-image-analysis computational-pathology cell-classification
Python
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Other
•82•390•13•10•Updated Dec 12, 2024Dec 12, 2024
cerberus
Public
One Model is All You Need: Multi-Task Learning Enables Simultaneous Histology Image Segmentation and Classification
python deep-learning pytorch multi-task-learning computational-pathology
Python
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GNU General Public License v3.0
•12•78•5•0•Updated Nov 27, 2024Nov 27, 2024
iguana
Public
Interpretable Gland-Graph Networks
python computational-pathology pytorch-geometric graph-neural-network deep-learning pytorch
Python
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GNU General Public License v3.0
•4•20•1•1•Updated Mar 7, 2024Mar 7, 2024
CoNIC
Public
CoNIC Challenge
Jupyter Notebook
•18•62•4•0•Updated Feb 19, 2024Feb 19, 2024
cytomine-hovernet
Public
Implementaiton of TIAToolbox's HoVer-Net in Cytomine
Python
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Apache License 2.0
•0•0•0•0•Updated Sep 27, 2023Sep 27, 2023
BRACE-marker
Public
Tumour Grade Composition Index
Python
•0•0•0•0•Updated Sep 14, 2023Sep 14, 2023
tiatoolbox-docker
Public
Docker Official Image packaging for Tiatoolbox
Dockerfile
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BSD 3-Clause "New" or "Revised" License
•0•1•1•0•Updated Apr 6, 2023Apr 6, 2023
tiatoolbox-feedstock
Public
A conda-smithy repository for tiatoolbox.
BSD 3-Clause "New" or "Revised" License
•5•0•0•0•Updated May 9, 2022May 9, 2022
staged-recipes
Public
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
Python
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BSD 3-Clause "New" or "Revised" License
•5k•1•0•0•Updated Jan 20, 2022Jan 20, 2022
pathcomp
Public
JavaScript
•0•0•0•0•Updated Mar 18, 2021Mar 18, 2021
PanNuke-metrics
Public archive
Evaluation code for the PanNuke dataset
Python
•6•26•0•0•Updated Oct 20, 2020Oct 20, 2020
TIAMultiProc
Public
Python
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GNU General Public License v3.0
•0•1•0•0•Updated Sep 28, 2020Sep 28, 2020
Context-Aware-CNN
Public
Context-Aware Convolutional Neural Network for Histology Images
Other
•1•8•2•0•Updated Jul 6, 2020Jul 6, 2020
hover_net
Public
Simultaneous Nuclear Instance Segmentation and Classification in H&E Histology Images.
Python
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MIT License
•228•3•0•0•Updated Mar 15, 2020Mar 15, 2020
ExtractPatchesFromAnnotatedRegions
Public
This pipeline will extract the annotated regions of WSI annotated by ASAP software based on the inputs such as patch size and resolution
Python
•1•3•1•0•Updated Dec 18, 2019Dec 18, 2019
TILAb-Score
Public
This repository contains the implementation of TILAb-score as described in the original paper.
Python
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Other
•3•17•0•0•Updated Oct 3, 2019Oct 3, 2019