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    17 repositories

    • GraphsGPT

      Public
      The official implementation of the ICML'24 paper "A Graph is Worth K Words: Euclideanizing Graph using Pure Transformer".
      Python
      •5•40•0•0•Updated Mar 19, 2025Mar 19, 2025

    • E3-CryoFold

      Public
      Python
      •
      MIT License
      •1•3•0•0•Updated Mar 6, 2025Mar 6, 2025

    • MeToken

      Public
      Python
      •
      MIT License
      •1•6•0•0•Updated Jan 9, 2025Jan 9, 2025

    • R3Design

      Public
      C++
      •1•4•0•0•Updated Nov 13, 2024Nov 13, 2024

    • FoldToken_open

      Public
      Python
      •1•14•3•0•Updated Nov 6, 2024Nov 6, 2024

    • FoldMaskGPT

      Public
      Python
      •1•0•0•0•Updated Oct 9, 2024Oct 9, 2024

    • FoldGPT_open

      Public
      Python
      •1•2•0•0•Updated Oct 9, 2024Oct 9, 2024

    • ProteinInvBench

      Public
      The official implementation of the NeurIPS'23 paper ProteinInvBench: Benchmarking Protein Design on Diverse Tasks, Models, and Metrics
      Python
      •8•175•7•0•Updated Sep 18, 2024Sep 18, 2024

    • LightningFlow

      Public
      A project template using Pytorch-Lightning
      Python
      •2•8•0•0•Updated Sep 10, 2024Sep 10, 2024

    • RDesign

      Public
      The official implementation of the ICLR'24 paper RDesign: Hierarchical Data-efficient Representation Learning for Tertiary Structure-based RNA Design.
      Python
      •0•42•8•0•Updated Aug 22, 2024Aug 22, 2024

    • RFold

      Public
      The official implementation of the ICML'24 paper RFold: Deciphering RNA Secondary Structure Prediction: A Probabilistic K-Rook Matching Perspective..
      Python
      •7•86•3•0•Updated Jul 20, 2024Jul 20, 2024

    • ADesigner

      Public
      The official implementation of the AAAI'24 paper Cross-Gate MLP with Protein Complex Invariant Embedding is A One-Shot Antibody Designer.
      Python
      •1•9•3•0•Updated Dec 28, 2023Dec 28, 2023

    • DiffSDS

      Public
      Official implementation of the paper "DiffSDS: A Language Diffusion Model for Protein Backbone Inpainting under Geometric Conditions and Constraints".
      Jupyter Notebook
      •2•14•0•0•Updated Jun 25, 2023Jun 25, 2023

    • MotifRetro

      Public
      The official implementation of the paper "MotifRetro: Exploring the Combinability-Consistency Trade-offs in retrosynthesis via Dynamic Motif Editing".
      Python
      •0•11•0•0•Updated Jun 25, 2023Jun 25, 2023

    • PiFold

      Public
      The official implementation of the ICLR'23 paper PiFold: Toward effective and efficient protein inverse folding.
      Python
      •
      MIT License
      •17•175•3•0•Updated Jun 17, 2023Jun 17, 2023

    • PrefixMol

      Public
      The official implementation of the paper "PrefixMol: Target-and Chemistry-aware Molecule Design via Prefix Embedding".
      Python
      •2•8•0•0•Updated Mar 12, 2023Mar 12, 2023

    • SimVP

      Public
      The official implementation of the CVPR'22 paper SimVP: Simpler Yet Better Video Prediction.
      Python
      •47•246•13•0•Updated Feb 21, 2023Feb 21, 2023