Apply the fix to noadata issue at land cover level3 #871
Workflow file for this run
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name: Run Code Checks | |
on: | |
push: | |
branches-ignore: [develop] | |
paths: | |
- '**' | |
- '!docker/**' | |
- '!.github/workflows/statistician-*' | |
- '!notebooks/**' | |
- '!docs/**' | |
- '!k8s/**' | |
- '!README.md' | |
tags: | |
- '**' | |
workflow_run: | |
workflows: ["Create a new tag"] | |
types: | |
- completed | |
permissions: | |
contents: read | |
packages: read | |
jobs: | |
build-wheels: | |
if: | | |
github.event_name == 'push' || (github.ref == 'refs/heads/develop' | |
&& github.event.workflow_run.conclusion == 'success') | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v4 | |
with: | |
fetch-depth: 0 | |
- uses: actions/cache@v4 | |
id: wheels_cache | |
with: | |
path: ./wheels | |
key: wheels-${{ github.sha }} | |
- name: Setup Python | |
uses: actions/setup-python@v5 | |
with: | |
python-version: "3.10" | |
- name: Install Dependencies | |
run: | | |
python -m pip install --upgrade pip | |
python -m pip install --upgrade \ | |
setuptools \ | |
setuptools-scm | |
python -m pip install --upgrade \ | |
toml \ | |
wheel \ | |
twine \ | |
packaging | |
python -m pip freeze | |
- name: Build Clean Packages | |
run: | | |
mkdir -p ./wheels/clean | |
python setup.py bdist_wheel --dist-dir ./wheels/clean/ | |
python setup.py sdist --dist-dir ./wheels/clean/ | |
find ./wheels/clean -type f | |
test-wheels: | |
runs-on: ubuntu-latest | |
container: | |
image: ghcr.io/${{ github.repository }}:latest | |
credentials: | |
username: ${{ github.actor }} | |
password: ${{ secrets.GITHUB_TOKEN }} | |
services: | |
postgres: | |
image: postgis/postgis:10-2.5 | |
env: | |
POSTGRES_DB: opendatacube | |
POSTGRES_PASSWORD: opendatacubepassword | |
POSTGRES_USER: opendatacube | |
needs: | |
- build-wheels | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Install Dependencies | |
shell: bash | |
run: | | |
apt update | |
DEBIAN_FRONTEND=noninteractive apt-get install -y \ | |
--fix-missing --no-install-recommends \ | |
nodejs \ | |
zstd | |
python -m pip install --upgrade --no-cache pip | |
pip install --upgrade --no-cache -r \ | |
tests/requirements.txt | |
pip freeze | |
- name: Get Wheels from Cache | |
uses: actions/cache@v4 | |
id: wheels_cache | |
with: | |
path: ./wheels | |
key: wheels-${{ github.sha }} | |
- name: Install wheels for testing | |
shell: bash | |
run: | | |
which python | |
which datacube | |
ls -lh wheels/clean | |
pip install --no-deps --no-cache wheels/clean/*whl | |
pip check || true | |
pip show odc-stats | |
which odc-stats | xargs ls -alt | |
odc-stats --version | |
- name: Run Tests | |
shell: bash | |
run: | | |
echo "Init DB" | |
./tests/init_db.sh | |
echo "Running unit tests" | |
pytest --cov=. \ | |
--cov-report=html \ | |
--cov-report=xml:coverage.xml \ | |
--timeout=30 tests | |
echo "Running integration tests" | |
./tests/integration_test.sh | |
env: | |
DB_HOSTNAME: postgres | |
DB_USERNAME: opendatacube | |
DB_PASSWORD: opendatacubepassword | |
DB_DATABASE: opendatacube | |
AWS_NO_SIGN_REQUEST: true | |
AWS_DEFAULT_REGION: ap-southeast-2 | |
AWS_REGION: ap-southeast-2 | |
STAC_API_URL: https://earth-search.aws.element84.com/v0/ | |
GDAL_HTTP_MAX_RETRY: 5 | |
- name: Upload Coverage | |
if: | | |
github.repository == 'opendatacube/odc-stats' | |
uses: codecov/codecov-action@v4 | |
with: | |
token: ${{ secrets.CODECOV_TOKEN }} | |
fail_ci_if_error: false | |
verbose: false |