Open Microscopy Environment EMDB OMERO.web extension application.
- OMERO 4.4.0 or later
Clone the repository in to your OMERO.web installation:
cd components/tools/OmeroWeb/omeroweb/
git clone git://github.com/openmicroscopy/webemdb.git
path/to/bin/omero config set omero.web.apps '["webemdb"]'
Now start up OMERO.web as normal in your development environment.
Install the latest version of OMERO.server and OMERO.web and then:
cd $OMERO_HOME/lib/python/omeroweb
wget -O master.zip https://github.com/openmicroscopy/webemdb/zipball/master
unzip master.zip
mv openmicroscopy-webemdb-* webemdb
path/to/bin/omero config set omero.web.apps '["webemdb"]'
You can then configure OMERO.web EMDB as per normal:
In order to enable the EMAN2 and caching functionality required for some pages of OMERO.web EMDB webemdb, you need to install EMAN2 so that:
from EMAN2 import *
produces no errors and then configure the following options:
$ bin/omero config set omero.web.use_eman2 True
$ bin/omero config set omero.web.cache_backend 'file:///var/tmp/django_cache'