Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Use omero-certificates #2123

Merged
merged 2 commits into from
May 12, 2020
Merged

Use omero-certificates #2123

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
2 commits
Select commit Hold shift + click to select a range
93daf9f
update doc to use omero-certificates
jburel Apr 29, 2020
2ec6207
adjust layout/config certificates
jburel May 11, 2020
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
7 changes: 5 additions & 2 deletions omero/sysadmins/unix/server-centos7-ice36.rst
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -78,7 +78,7 @@ Installing OMERO.server

**The following step is run as root.**

We recommend to create a virtual environment and install the Ice Python binding and PyTables_ using ``pip``:
We recommend to create a virtual environment and install the Ice Python binding and the dependencies required by the server using ``pip``:

.. literalinclude:: walkthrough/walkthrough_centos7.sh
:start-after: #start-step03bis
Expand All @@ -102,6 +102,9 @@ Change the ownership of the OMERO.server directory and create a symlink:
:start-after: #end-release-ice36
:end-before: #end-step04-pre

Configuring OMERO.server
------------------------

**The following steps are run as the omero-server system user.** (``su - omero-server``)

The variable ``OMERODIR`` set in :download:`settings.env <walkthrough/settings.env>` above **must** point to the location where OMERO.server is installed.
Expand All @@ -111,7 +114,7 @@ Note that this script requires the same environment variables that were set
earlier in `settings.env`, so you may need to copy and/or source this file as
the omero user.

Configure the server:
Configure the database and the location of the data directory:

.. literalinclude:: walkthrough/walkthrough_centos7.sh
:start-after: #end-copy-omeroscript
Expand Down
15 changes: 7 additions & 8 deletions omero/sysadmins/unix/server-centos8-ice36.rst
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -78,7 +78,7 @@ Installing OMERO.server

**The following step is run as root.**

We recommend to create a virtual environment and install the Ice Python binding and PyTables_ using ``pip``:
We recommend to create a virtual environment and install the Ice Python binding and the dependencies required by the server using ``pip``:

.. literalinclude:: walkthrough/walkthrough_centos8.sh
:start-after: #start-step03bis
Expand All @@ -102,6 +102,9 @@ Change the ownership of the OMERO.server directory and create a symlink:
:start-after: #end-release-ice36
:end-before: #end-step04-pre

Configuring OMERO.server
------------------------

**The following steps are run as the omero-server system user.** (``su - omero-server``)

The variable ``OMERODIR`` set in :download:`settings.env <walkthrough/settings.env>` above **must** point to the location where OMERO.server is installed.
Expand All @@ -111,22 +114,18 @@ Note that this script requires the same environment variables that were set
earlier in `settings.env`, so you may need to copy and/or source this file as
the omero user.

Configure the server:
Configure the database and the location of the data directory:

.. literalinclude:: walkthrough/walkthrough_centos8.sh
:start-after: #end-copy-omeroscript
:end-before: #end-step04

Patching OMERO.server
---------------------

Weaker ciphers like ADH are disabled by default in OpenSSL 1.1.0,
the version installed on Debian 10.
Weaker ciphers like ADH are disabled by default in OpenSSL 1.1+,
the version installed on CentOS 8.
This means that it is not possible to connect to an OMERO.server
using any OMERO clients e.g. the Java Desktop client,
the OMERO.web client or the CLI.
The parameter ``@SECLEVEL=0``, enabling the weaker ciphers, needs to be
set in order to allow connection.

.. literalinclude:: walkthrough/walkthrough_centos8.sh
:start-after: #start-seclevel
Expand Down
16 changes: 7 additions & 9 deletions omero/sysadmins/unix/server-debian10-ice36.rst
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -79,7 +79,7 @@ Installing OMERO.server

**The following step is run as root.**

We recommend to create a virtual environment and install the Ice Python binding and PyTables_ using ``pip``:
We recommend to create a virtual environment and install the Ice Python binding and the dependencies required by the server using ``pip``:

.. literalinclude:: walkthrough/walkthrough_debian10.sh
:start-after: #start-step03bis
Expand All @@ -103,6 +103,9 @@ Change the ownership of the OMERO.server directory and create a symlink:
:start-after: #end-release-ice36
:end-before: #end-step04-pre

Configuring OMERO.server
------------------------

**The following steps are run as the omero-server system user.**

The variable :envvar:`OMERODIR` set in :download:`settings.env <walkthrough/settings.env>` above **must** point to the location where OMERO.server is installed.
Expand All @@ -112,22 +115,17 @@ Note that this script requires the same environment variables that were set
earlier in `settings.env`, so you may need to copy and/or source this file as
the omero user.

Configure the server:
Configure the database and the location of the data directory:

.. literalinclude:: walkthrough/walkthrough_debian10.sh
:start-after: #end-copy-omeroscript
:end-before: #end-step04

Patching OMERO.server
---------------------

Weaker ciphers like ADH are disabled by default in OpenSSL 1.1.0,
Weaker ciphers like ADH are disabled by default in OpenSSL 1.1+,
the version installed on Debian 10.
This means that it is not possible to connect to an OMERO.server
using any OMERO clients e.g. the Java Desktop client,
the OMERO.web client or the CLI.
The parameter ``@SECLEVEL=0``, enabling the weaker ciphers, needs to be
set in order to allow connection.
the OMERO.web client or the CLI. Run:

.. literalinclude:: walkthrough/walkthrough_debian10.sh
:start-after: #start-seclevel
Expand Down
14 changes: 6 additions & 8 deletions omero/sysadmins/unix/server-debian9-ice36.rst
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -92,7 +92,7 @@ Installing OMERO.server

**The following step is run as root.**

We recommend to create a virtual environment and install the Ice Python binding and PyTables_ using ``pip``:
We recommend to create a virtual environment and install the Ice Python binding and the dependencies required by the server using ``pip``:

.. literalinclude:: walkthrough/walkthrough_debian9.sh
:start-after: #start-step03bis
Expand All @@ -116,6 +116,9 @@ Change the ownership of the OMERO.server directory and create a symlink:
:start-after: #end-release-ice36
:end-before: #end-step04-pre

Configuring OMERO.server
------------------------

**The following steps are run as the omero-server system user.** (``su - omero-server``)

The variable ``OMERODIR`` set in :download:`settings.env <walkthrough/settings.env>` above **must** point to the location where OMERO.server is installed.
Expand All @@ -125,22 +128,17 @@ Note that this script requires the same environment variables that were set
earlier in `settings.env`, so you may need to copy and/or source this file as
the omero user.

Configure the server:
Configure the database and the location of the data directory:

.. literalinclude:: walkthrough/walkthrough_debian9.sh
:start-after: #end-copy-omeroscript
:end-before: #end-step04

Patching OMERO.server
---------------------

Weaker ciphers like ADH are disabled by default in OpenSSL 1.1.0,
the version installed on Debian 9.
This means that it is not possible to connect to an OMERO.server
using any OMERO clients e.g. the Java Desktop client,
the OMERO.web client or the CLI.
The parameter ``@SECLEVEL=0``, enabling the weaker ciphers, needs to be
set in order to allow connection.
the OMERO.web client or the CLI. Run:

.. literalinclude:: walkthrough/walkthrough_debian9.sh
:start-after: #start-seclevel
Expand Down
7 changes: 5 additions & 2 deletions omero/sysadmins/unix/server-ubuntu1604-ice36.rst
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -78,7 +78,7 @@ Installing OMERO.server

**The following step is run as root.**

We recommend to create a virtual environment and install the Ice Python binding and PyTables_ using ``pip``:
We recommend to create a virtual environment and install the Ice Python binding and the dependencies required by the server using ``pip``:

.. literalinclude:: walkthrough/walkthrough_ubuntu1604.sh
:start-after: #start-step03bis
Expand All @@ -102,6 +102,9 @@ Change the ownership of the OMERO.server directory and create a symlink:
:start-after: #end-release-ice36
:end-before: #end-step04-pre

Configuring OMERO.server
------------------------

**The following steps are run as the omero-server system user.** (``su - omero-server``)

The variable ``OMERODIR`` set in :download:`settings.env <walkthrough/settings.env>` above **must** point to the location where OMERO.server is installed.
Expand All @@ -111,7 +114,7 @@ Note that this script requires the same environment variables that were set
earlier in `settings.env`, so you may need to copy and/or source this file as
the omero user.

Configure the server:
Configure the database and the location of the data directory:

.. literalinclude:: walkthrough/walkthrough_ubuntu1604.sh
:start-after: #end-copy-omeroscript
Expand Down
16 changes: 7 additions & 9 deletions omero/sysadmins/unix/server-ubuntu1804-ice36.rst
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -84,7 +84,7 @@ Installing OMERO.server

**The following step is run as root.**

We recommend to create a virtual environment and install the Ice Python binding and PyTables_ using ``pip``:
We recommend to create a virtual environment and install the Ice Python binding and the dependencies required by the server using ``pip``:

.. literalinclude:: walkthrough/walkthrough_ubuntu1804.sh
:start-after: #start-step03bis
Expand All @@ -108,6 +108,9 @@ Change the ownership of the OMERO.server directory and create a symlink:
:start-after: #end-release-ice36
:end-before: #end-step04-pre

Configuring OMERO.server
------------------------

**The following steps are run as the omero-server system user.** (``su - omero-server``)

The variable ``OMERODIR`` set in :download:`settings.env <walkthrough/settings.env>` above **must** point to the location where OMERO.server is installed.
Expand All @@ -117,22 +120,17 @@ Note that this script requires the same environment variables that were set
earlier in `settings.env`, so you may need to copy and/or source this file as
the omero user.

Configure the server:
Configure the database and the location of the data directory:

.. literalinclude:: walkthrough/walkthrough_ubuntu1804.sh
:start-after: #end-copy-omeroscript
:end-before: #end-step04

Patching OMERO.server
---------------------

Weaker ciphers like ADH are disabled by default in OpenSSL 1.1.0,
Weaker ciphers like ADH are disabled by default in OpenSSL 1.1+,
the version installed on Ubuntu 18.04.
This means that it is not possible to connect to an OMERO.server
using any OMERO clients e.g. the Java Desktop client,
the OMERO.web client or the CLI.
The parameter ``@SECLEVEL=0``, enabling the weaker ciphers, needs to be
set in order to allow connection.
the OMERO.web client or the CLI. Run:

.. literalinclude:: walkthrough/walkthrough_ubuntu1804.sh
:start-after: #start-seclevel
Expand Down
15 changes: 7 additions & 8 deletions omero/sysadmins/unix/server-ubuntu2004-ice36.rst
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -84,7 +84,7 @@ Installing OMERO.server

**The following step is run as root.**

We recommend to create a virtual environment and install the Ice Python binding and PyTables_ using ``pip``:
We recommend to create a virtual environment and install the Ice Python binding and the dependencies required by the server using ``pip``:

.. literalinclude:: walkthrough/walkthrough_ubuntu2004.sh
:start-after: #start-step03bis
Expand All @@ -108,6 +108,9 @@ Change the ownership of the OMERO.server directory and create a symlink:
:start-after: #end-release-ice36
:end-before: #end-step04-pre

Configuring OMERO.server
------------------------

**The following steps are run as the omero-server system user.** (``su - omero-server``)

The variable ``OMERODIR`` set in :download:`settings.env <walkthrough/settings.env>` above **must** point to the location where OMERO.server is installed.
Expand All @@ -117,22 +120,18 @@ Note that this script requires the same environment variables that were set
earlier in `settings.env`, so you may need to copy and/or source this file as
the omero user.

Configure the server:
Configure the database and the location of the data directory:

.. literalinclude:: walkthrough/walkthrough_ubuntu2004.sh
:start-after: #end-copy-omeroscript
:end-before: #end-step04

Patching OMERO.server
---------------------

Weaker ciphers like ADH are disabled by default in OpenSSL 1.1.0,
Weaker ciphers like ADH are disabled by default in OpenSSL 1.1+,
the version installed on Ubuntu 20.04.
This means that it is not possible to connect to an OMERO.server
using any OMERO clients e.g. the Java Desktop client,
the OMERO.web client or the CLI.
The parameter ``@SECLEVEL=0``, enabling the weaker ciphers, needs to be
set in order to allow connection.
Run:

.. literalinclude:: walkthrough/walkthrough_ubuntu2004.sh
:start-after: #start-seclevel
Expand Down