some long awaited fixes #152
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…r errors for other reasons than not found, since we give the values provided in the configuration anyway
…ptions needlessly
…nd the logging method described in the configuration file
…t specified and make the toml writer to write all the layers before the user one in the configuration it writes to disk in case of missing configuration
…, to reduce log complexity
…ributes when their output in the logs would be redundant
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ever since my previous pull request got closed prematurely, there have been some bugs, which I'm fixing here. A non-exhaustive list of bugs and unexpected behaviours is as follows: