Fixed tests (#24)

ocbe-uio · Jul 2, 2024 · e4af251 · e4af251
1 parent 00ecfa4
commit e4af251
Showing 1 changed file with 5 additions and 6 deletions.
diff --git a/tests/testthat/test-greedyMix.R b/tests/testthat/test-greedyMix.R
@@ -46,11 +46,10 @@ raw_bam <- importFile(
   data    = file.path(path_inst, "bam_example.bam"),
   format  = "BAM",
 )
-# TODO: uncomment for testing #24
-# raw_baps <- importFile(
-#   data   = file.path(path_inst, "FASTA_clustering_haploid.fasta"),
-#   format = "FASTA"
-# )
+raw_baps <- importFile(
+  data   = file.path(path_inst, "FASTA_clustering_haploid.fasta"),
+  format = "FASTA"
+)
 
 test_that("Files are imported correctly", {
   expect_equal(dim(raw_fasta), c(5, 99))
@@ -71,7 +70,7 @@ test_that("Files are imported correctly", {
   )
 })
 
-test_that("greedyMix() works", {
+test_that("greedyMix() fails successfully", {
   expect_error(greedyMix(file.path(path_inst, "vcf_example.vcf")))
   expect_error(greedyMix(file.path(path_inst, "bam_example.bam")))
 })