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requirements.txt
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requirements.txt
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# This file was autogenerated by uv via the following command:
# uv pip compile --strip-extras pyproject.toml -o requirements.txt -p 3.11 -c -
astor==0.8.1
# via formulaic
attrs==23.2.0
# via niworkflows
bids-validator==1.14.6
# via pybids
certifi==2024.7.4
# via requests
charset-normalizer==3.3.2
# via requests
ci-info==0.3.0
# via etelemetry
click==8.1.7
# via
# nipype
# pybids
contourpy==1.2.1
# via matplotlib
cycler==0.12.1
# via matplotlib
docopt==0.6.2
# via num2words
etelemetry==0.3.1
# via nipype
filelock==3.15.4
# via nipype
fonttools==4.53.1
# via matplotlib
formulaic==0.5.2
# via pybids
greenlet==3.0.3
# via sqlalchemy
h5py==3.11.0
# via nitransforms
idna==3.7
# via requests
imageio==2.34.2
# via scikit-image
indexed-gzip==1.8.7
# via smriprep (pyproject.toml)
interface-meta==1.3.0
# via formulaic
isodate==0.6.1
# via rdflib
jinja2==3.1.4
# via niworkflows
joblib==1.4.2
# via
# nilearn
# scikit-learn
kiwisolver==1.4.5
# via matplotlib
lazy-loader==0.4
# via scikit-image
lockfile==0.12.2
# via smriprep (pyproject.toml)
looseversion==1.3.0
# via
# smriprep (pyproject.toml)
# nipype
# niworkflows
lxml==5.2.2
# via
# nilearn
# prov
# svgutils
markupsafe==2.1.5
# via jinja2
matplotlib==3.9.1
# via
# smriprep (pyproject.toml)
# niworkflows
# seaborn
networkx==3.3
# via
# nipype
# prov
# scikit-image
nibabel==5.2.1
# via
# smriprep (pyproject.toml)
# nilearn
# nipype
# nitransforms
# niworkflows
# pybids
nilearn==0.10.4
# via niworkflows
nipype==1.8.6
# via
# smriprep (pyproject.toml)
# niworkflows
nitransforms==23.0.1
# via niworkflows
niworkflows==1.10.2
# via smriprep (pyproject.toml)
num2words==0.5.13
# via pybids
numpy==1.26.4
# via
# smriprep (pyproject.toml)
# contourpy
# formulaic
# h5py
# imageio
# matplotlib
# nibabel
# nilearn
# nipype
# nitransforms
# niworkflows
# pandas
# pybids
# scikit-image
# scikit-learn
# scipy
# seaborn
# tifffile
# transforms3d
packaging==24.1
# via
# smriprep (pyproject.toml)
# etelemetry
# lazy-loader
# matplotlib
# nibabel
# nilearn
# nipype
# niworkflows
# scikit-image
pandas==2.2.2
# via
# formulaic
# nilearn
# niworkflows
# pybids
# seaborn
pillow==10.4.0
# via
# imageio
# matplotlib
# scikit-image
prov==2.0.1
# via nipype
pybids==0.16.5
# via
# smriprep (pyproject.toml)
# niworkflows
# templateflow
pydot==3.0.1
# via nipype
pyparsing==3.1.2
# via
# matplotlib
# pydot
# rdflib
python-dateutil==2.9.0.post0
# via
# matplotlib
# nipype
# pandas
# prov
pytz==2024.1
# via pandas
pyyaml==6.0.1
# via
# smriprep (pyproject.toml)
# niworkflows
rdflib==6.3.2
# via
# nipype
# prov
requests==2.32.3
# via
# etelemetry
# nilearn
# templateflow
scikit-image==0.23.2
# via niworkflows
scikit-learn==1.4.2
# via nilearn
scipy==1.13.1
# via
# formulaic
# nilearn
# nipype
# nitransforms
# niworkflows
# pybids
# scikit-image
# scikit-learn
seaborn==0.13.2
# via niworkflows
simplejson==3.19.2
# via nipype
six==1.16.0
# via
# isodate
# python-dateutil
sqlalchemy==2.0.31
# via pybids
svgutils==0.3.4
# via niworkflows
templateflow==24.2.0
# via
# smriprep (pyproject.toml)
# niworkflows
threadpoolctl==3.5.0
# via scikit-learn
tifffile==2024.7.2
# via scikit-image
tqdm==4.66.4
# via templateflow
traits==6.3.2
# via
# nipype
# niworkflows
transforms3d==0.4.2
# via niworkflows
typing-extensions==4.12.2
# via
# formulaic
# sqlalchemy
tzdata==2024.1
# via pandas
urllib3==2.2.2
# via requests
wrapt==1.16.0
# via formulaic