Add test data for Baysor module #1440
Merged
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
|
update README |
|
Hi @sateeshperi can you tell me more about what do you exactly mean? The README I have is the same as the one from the master branch |
|
correct that you have the same as modules branch you, just need to update the README as well with information about the test-data you are uploading |
|
Understood! README updated. I ended up creating a new folder for the dataset since it did not fit the current categories |
sateeshperi
approved these changes
Jan 2, 2025
|
Hi @sateeshperi , many apologies but I forgot to upload another file for testing the module. At the end created a new PR #1451 |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
This minimal dataset is for a module I am currently working on for a tool named Baysor. To test it, I need a CSV file that has a specific heading for each column of the file (x-location of transcript, transcript’s name, etc). There are currently no available datasets with this requirements (the Molkart pipeline has a similar dataset but without the column names, also, it seems too tiny to work for this module).