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Merge pull request #808 from nf-core/create-pull-request/patch #2808

Merge pull request #808 from nf-core/create-pull-request/patch

Merge pull request #808 from nf-core/create-pull-request/patch #2808

Triggered via push November 30, 2024 06:09
Status Failure
Total duration 1m 46s
Artifacts

main.yml

on: push
Check if all profiles are tested
5s
Check if all profiles are tested
Check if nextflow config runs in repository root
16s
Check if nextflow config runs in repository root
Matrix: profile_test
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156 errors and 1 warning
Run bigpurple profile
Could not run 'nextflow help'. Error: The process '/opt/hostedtoolcache/nextflow/24.10.2/x64/nextflow' failed with exit code 1
Run ceci_dragon2 profile
The job was canceled because "bigpurple" failed.
Run abims profile
The job was canceled because "bigpurple" failed.
Run biowulf profile
The job was canceled because "bigpurple" failed.
Run cambridge profile
The job was canceled because "bigpurple" failed.
Run daisybio profile
The job was canceled because "bigpurple" failed.
Run dkfz profile
The job was canceled because "bigpurple" failed.
Run ethz_euler profile
The job was canceled because "bigpurple" failed.
Run embl_hd profile
The job was canceled because "bigpurple" failed.
Run genouest profile
The job was canceled because "bigpurple" failed.
Run ebc profile
The job was canceled because "bigpurple" failed.
Run hypatia profile
The job was canceled because "bigpurple" failed.
Run adcra profile
The job was canceled because "bigpurple" failed.
Run fub_curta profile
The job was canceled because "bigpurple" failed.
Run awsbatch profile
The job was canceled because "bigpurple" failed.
Run awsbatch profile
The operation was canceled.
Run aws_tower profile
The job was canceled because "bigpurple" failed.
Run aws_tower profile
The operation was canceled.
Run azurebatch profile
The job was canceled because "bigpurple" failed.
Run ebi_codon_slurm profile
The job was canceled because "bigpurple" failed.
Run crick profile
The job was canceled because "bigpurple" failed.
Run binac profile
The job was canceled because "bigpurple" failed.
Run binac profile
The operation was canceled.
Run engaging profile
The job was canceled because "bigpurple" failed.
Run cbe profile
The job was canceled because "bigpurple" failed.
Run engaging profile
The operation was canceled.
Run crg profile
The job was canceled because "bigpurple" failed.
Run ilifu profile
The job was canceled because "bigpurple" failed.
Run ilifu profile
The operation was canceled.
Run imperial profile
The job was canceled because "bigpurple" failed.
Run imperial profile
The operation was canceled.
Run create profile
The job was canceled because "bigpurple" failed.
Run gis profile
The job was canceled because "bigpurple" failed.
Run gis profile
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Run gis profile
--local can only be used inside a git repository
Run gis profile
not a git repository (or any of the parent directories): .git
Run icr_davros profile
The job was canceled because "bigpurple" failed.
Run icr_davros profile
The operation was canceled.
Run ebi_codon profile
The job was canceled because "bigpurple" failed.
Run ebi_codon profile
The operation was canceled.
Run eddie profile
The job was canceled because "bigpurple" failed.
Run eddie profile
The operation was canceled.
Run crukmi profile
The job was canceled because "bigpurple" failed.
Run fgcz profile
The job was canceled because "bigpurple" failed.
Run fgcz profile
The operation was canceled.
Run ceci_nic5 profile
The job was canceled because "bigpurple" failed.
Run cheaha profile
The job was canceled because "bigpurple" failed.
Run cheaha profile
The operation was canceled.
Run ceres profile
The job was canceled because "bigpurple" failed.
Run ceres profile
The operation was canceled.
Run eva profile
The job was canceled because "bigpurple" failed.
Run eva profile
The operation was canceled.
Run incliva profile
The job was canceled because "bigpurple" failed.
Run imb profile
The job was canceled because "bigpurple" failed.
Run m3c profile
The job was canceled because "bigpurple" failed.
Run ipop_up profile
The job was canceled because "bigpurple" failed.
Run cedars profile
The job was canceled because "bigpurple" failed.
Run cedars profile
The operation was canceled.
Run ku_sund_danhead profile
The job was canceled because "bigpurple" failed.
Run leicester profile
The job was canceled because "bigpurple" failed.
Run maestro profile
The job was canceled because "bigpurple" failed.
Run lugh profile
The job was canceled because "bigpurple" failed.
Run mana profile
The job was canceled because "bigpurple" failed.
Run marvin profile
The job was canceled because "bigpurple" failed.
Run marjorie profile
The job was canceled because "bigpurple" failed.
Run mjolnir_globe profile
The job was canceled because "bigpurple" failed.
Run mccleary profile
The job was canceled because "bigpurple" failed.
Run medair profile
The job was canceled because "bigpurple" failed.
Run munin profile
The job was canceled because "bigpurple" failed.
Run mpcdf_viper profile
The job was canceled because "bigpurple" failed.
Run mpcdf profile
The job was canceled because "bigpurple" failed.
Run computerome profile
The job was canceled because "bigpurple" failed.
Run computerome profile
The operation was canceled.
Run csiro_petrichor profile
The job was canceled because "bigpurple" failed.
Run csiro_petrichor profile
The operation was canceled.
Run nci_gadi profile
The job was canceled because "bigpurple" failed.
Run nu_genomics profile
The job was canceled because "bigpurple" failed.
Run nygc profile
The job was canceled because "bigpurple" failed.
Run oist profile
The job was canceled because "bigpurple" failed.
Run pawsey_nimbus profile
The job was canceled because "bigpurple" failed.
Run pasteur profile
The job was canceled because "bigpurple" failed.
Run nyu_hpc profile
The job was canceled because "bigpurple" failed.
Run pawsey_setonix profile
The job was canceled because "bigpurple" failed.
Run unsw_katana profile
The job was canceled because "bigpurple" failed.
Run pe2 profile
The job was canceled because "bigpurple" failed.
Run qmul_apocrita profile
The job was canceled because "bigpurple" failed.
Run pdc_kth profile
The job was canceled because "bigpurple" failed.
Run phoenix profile
The job was canceled because "bigpurple" failed.
Run psmn profile
The job was canceled because "bigpurple" failed.
Run roslin profile
The job was canceled because "bigpurple" failed.
Run rosalind profile
The job was canceled because "bigpurple" failed.
Run sage profile
The job was canceled because "bigpurple" failed.
Run rosalind_uge profile
The job was canceled because "bigpurple" failed.
Run sahmri profile
The job was canceled because "bigpurple" failed.
Run sanger profile
The job was canceled because "bigpurple" failed.
Run genotoul profile
The job was canceled because "bigpurple" failed.
Run genotoul profile
The operation was canceled.
Run scw profile
The job was canceled because "bigpurple" failed.
Run google profile
The job was canceled because "bigpurple" failed.
Run google profile
The operation was canceled.
Run seawulf profile
The job was canceled because "bigpurple" failed.
Run seg_globe profile
The job was canceled because "bigpurple" failed.
Run self_hosted_runner profile
The job was canceled because "bigpurple" failed.
Run software_license profile
The job was canceled because "bigpurple" failed.
Run tigem profile
The job was canceled because "bigpurple" failed.
Run tes profile
The job was canceled because "bigpurple" failed.
Run shu_bmrc profile
The job was canceled because "bigpurple" failed.
Run stjude profile
The job was canceled because "bigpurple" failed.
Run tufts profile
The job was canceled because "bigpurple" failed.
Run tubingen_apg profile
The job was canceled because "bigpurple" failed.
Run tuos_stanage profile
The job was canceled because "bigpurple" failed.
Run ucl_cscluster profile
The job was canceled because "bigpurple" failed.
Run uct_hpc profile
The job was canceled because "bigpurple" failed.
Run ucd_sonic profile
The job was canceled because "bigpurple" failed.
Run unc_longleaf profile
The job was canceled because "bigpurple" failed.
Run unc_lccc profile
The job was canceled because "bigpurple" failed.
Run ucl_myriad profile
The job was canceled because "bigpurple" failed.
Run uge profile
The job was canceled because "bigpurple" failed.
Run unibe_ibu profile
The job was canceled because "bigpurple" failed.
Run uod_hpc profile
The job was canceled because "bigpurple" failed.
Run hki profile
The job was canceled because "bigpurple" failed.
Run hki profile
The operation was canceled.
Run uppmax profile
The job was canceled because "bigpurple" failed.
Run uzh profile
The job was canceled because "bigpurple" failed.
Run utd_ganymede profile
The job was canceled because "bigpurple" failed.
Run einstein profile
The job was canceled because "bigpurple" failed.
Run einstein profile
The operation was canceled.
Run uw_hyak_pedslabs profile
The job was canceled because "bigpurple" failed.
Run giga profile
The job was canceled because "bigpurple" failed.
Run giga profile
The operation was canceled.
Run uzl_omics profile
The job was canceled because "bigpurple" failed.
Run vai profile
The job was canceled because "bigpurple" failed.
Run vsc_calcua profile
The job was canceled because "bigpurple" failed.
Run vsc_ugent profile
The job was canceled because "bigpurple" failed.
Run vsc_kul_uhasselt profile
The job was canceled because "bigpurple" failed.
Run xanadu profile
The job was canceled because "bigpurple" failed.
Run york_viking profile
The job was canceled because "bigpurple" failed.
Run wehi profile
The job was canceled because "bigpurple" failed.
Run wustl_htcf profile
The job was canceled because "bigpurple" failed.
Run bih profile
The job was canceled because "bigpurple" failed.
Run bih profile
The operation was canceled.
Run bi profile
The job was canceled because "bigpurple" failed.
Run bi profile
The operation was canceled.
Run hasta profile
The job was canceled because "bigpurple" failed.
Run hasta profile
The operation was canceled.
Run ifb_core profile
The job was canceled because "bigpurple" failed.
Run ifb_core profile
The operation was canceled.
Run jex profile
The job was canceled because "bigpurple" failed.
Run jax profile
The job was canceled because "bigpurple" failed.
Run janelia profile
The job was canceled because "bigpurple" failed.
Run googlels profile
The job was canceled because "bigpurple" failed.
Run googlels profile
The operation was canceled.
Run googlebatch profile
The job was canceled because "bigpurple" failed.
Run googlebatch profile
The operation was canceled.
Run denbi_qbic profile
The job was canceled because "bigpurple" failed.
Run denbi_qbic profile
The operation was canceled.
Run gis profile
The process '/usr/bin/git' failed with exit code 128