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Release 2.12.0 #794

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merged 33 commits into from
Nov 15, 2024
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524d298
bump version to 2.12.0dev
d4straub Aug 5, 2024
2f7c754
update CHANGELOG
d4straub Aug 5, 2024
ba86470
Merge pull request #772 from d4straub/bump-version-2.12.0dev
d4straub Aug 6, 2024
fa472fb
merging template updates v3.0.2
d4straub Oct 18, 2024
47efc2f
fix typo
d4straub Oct 21, 2024
754d92d
[automated] Fix code linting
nf-core-bot Oct 21, 2024
68b8731
update nf-schema and json schemata
d4straub Oct 21, 2024
c9ee1e7
update md5sums for multiqc files
d4straub Oct 21, 2024
36e1ef1
Merge branch 'merging-template-updates_3.0.2' of https://github.com/d…
d4straub Oct 21, 2024
4ffc595
activate nf-schema lenientMode
d4straub Oct 21, 2024
07fcdd8
fix typo
d4straub Oct 21, 2024
a106c5d
update md5sums in snaps
d4straub Oct 21, 2024
fe2ec7b
replace https://data.ace.uq.edu.au/public/gtdb/data by https://data.g…
d4straub Oct 21, 2024
e19a70e
update CHANGELOG
d4straub Oct 21, 2024
d288b34
remove unused code
d4straub Oct 21, 2024
1889bab
update test profile snap
d4straub Oct 21, 2024
ce6684f
correct indentation
d4straub Oct 21, 2024
0ac3093
Merge pull request #785 from d4straub/merging-template-updates_3.0.2
d4straub Oct 21, 2024
12c0370
fix --dada_ref_taxonomy silva=132
d4straub Oct 24, 2024
f95cf02
Merge pull request #786 from d4straub/fix-dada_ref_taxonomy-silva132
d4straub Oct 25, 2024
d8e7eb6
Remove white spaces in process tags
d4straub Nov 12, 2024
08bafc9
update changelog
d4straub Nov 12, 2024
65bada8
Merge pull request #792 from d4straub/rm-white-space-in-process-tag
d4straub Nov 12, 2024
4e4c124
update nf-core modules and picrust
d4straub Nov 12, 2024
2c22f74
update changelog
d4straub Nov 12, 2024
9cb08c2
Merge pull request #793 from d4straub/update-modules-2.12.0dev
d4straub Nov 12, 2024
45a764c
bump version 2.12.0
d4straub Nov 13, 2024
96be42b
update CHANGELOG
d4straub Nov 13, 2024
0052ee0
include custom configs
d4straub Nov 13, 2024
88b5322
update docs
d4straub Nov 13, 2024
675d60b
Merge pull request #795 from d4straub/prepare-release-2.12.0
d4straub Nov 13, 2024
9162fe0
disable checking for reviews on workflow_dispatch
mashehu Nov 14, 2024
ca63a52
Apply suggestions from code review
d4straub Nov 14, 2024
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d4straub authored Nov 14, 2024
commit ca63a521edd3bbc3f0508375db9dc65688f9471e
3 changes: 2 additions & 1 deletion CHANGELOG.md
Original file line number Diff line number Diff line change
Expand Up @@ -3,7 +3,7 @@
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).

## nf-core/ampliseq version 2.12.0
## nf-core/ampliseq version 2.12.0 - 2024-11-14

### `Added`

Expand All @@ -27,6 +27,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
| software | previously | now |
| -------- | ---------- | ------ |
| MultiQC | 1.21 | 1.25.1 |
d4straub marked this conversation as resolved.
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| Kraken2 | 2.1.2 | 2.1.3 |
| Picrust2 | 2.5.2 | 2.5.3 |
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### `Removed`
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