Skip to content

Commit

Permalink
Merge pull request #687 from d4straub/fix-FILTER_SSU-conda
Browse files Browse the repository at this point in the history
fix conda package in FILTER_SSU
  • Loading branch information
d4straub authored Jan 12, 2024
2 parents 1798c4a + 54e3d60 commit 591ac20
Show file tree
Hide file tree
Showing 2 changed files with 2 additions and 1 deletion.
1 change: 1 addition & 0 deletions CHANGELOG.md
Original file line number Diff line number Diff line change
Expand Up @@ -25,6 +25,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
- [#679](https://github.com/nf-core/ampliseq/pull/679) - Prevent masking low complexity regions by VSEARCH with lower case letters
- [#680](https://github.com/nf-core/ampliseq/pull/680) - Improved pipeline summary report & error messages
- [#683](https://github.com/nf-core/ampliseq/pull/683) - Template update for nf-core/tools version 2.11
- [#687](https://github.com/nf-core/ampliseq/pull/687) - Correct conda package for ASV SSU filtering

### `Dependencies`

Expand Down
2 changes: 1 addition & 1 deletion modules/local/filter_ssu.nf
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@ process FILTER_SSU {
tag "${fasta}"
label 'process_low'

conda "bioconductor::biostrings=2.58.0"
conda "bioconda::bioconductor-biostrings=2.58.0"
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://depot.galaxyproject.org/singularity/bioconductor-biostrings:2.58.0--r40h037d062_0' :
'biocontainers/bioconductor-biostrings:2.58.0--r40h037d062_0' }"
Expand Down

0 comments on commit 591ac20

Please sign in to comment.