Skip to content

Pull requests: nextflow-io/nextflow

New pull request New
86 Open 1,925 Closed
86 Open 1,925 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Assigned to nobody Loading
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

Add nextflow launch command
#6491 opened Oct 17, 2025 by jorgee Loading…
28
Replace lineage staged task inputs with FileHolder changes
#6490 opened Oct 16, 2025 by jorgee Loading… 25.10
1
Optimize exit code handling by relying on scheduler status for successful executions
#6484 opened Oct 14, 2025 by jorgee Loading… 25.10
2
2
docs: Update trace table columns in reports.md
#6483 opened Oct 13, 2025 by JustinBellavance Loading…
1
Type checking support
#6482 opened Oct 13, 2025 by bentsherman Loading… 25.10
5
Make notifyEvent asynchronous
#6471 opened Oct 11, 2025 by rcannood Loading…
1
docs: Add admonition to inputs and index words
#6461 opened Oct 9, 2025 by christopher-hakkaart Loading…
6
Track remote input file in FileHolder
#6460 opened Oct 8, 2025 by bentsherman Loading… 25.10
1
2
Add .command.log redirection in K8s container command when Fusion is not enabled executor/k8s
#6455 opened Oct 7, 2025 by jorgee Loading… 25.10
3
Add staging events to the TraceObserverV2
#6443 opened Oct 2, 2025 by rcannood Loading…
1
8
Fix #6182: Add Google Batch LogsPolicy PATH option for GCS bucket log… executor/google-batch
#6431 opened Sep 26, 2025 by dglazer Loading…
4
enhance: Upgrade Claude Code hooks with advanced JSON reporting
#6429 opened Sep 25, 2025 by edmundmiller Loading…
@edmundmiller
2
Determine Azure directories more accurately using metadata and blob properties storage/azure
#6428 opened Sep 25, 2025 by adamrtalbot Loading…
1
10
Fix: tolerate spaces in $NXF_TASK_WORKDIR software/bash
#6421 opened Sep 23, 2025 by TheLostLambda Loading…
1
Limit S3 client connections when using virtual threads storage/aws
#6369 opened Aug 28, 2025 by jorgee Loading… 25.10
1
44
Support running nextflow script in cygwin software/bash
#6367 opened Aug 27, 2025 by markwoon Loading…
5
Use Managed Identities with Azure to download and upload files executor/azure-batch
#6344 opened Aug 14, 2025 by adamrtalbot Loading…
1
Package directive
#6342 opened Aug 14, 2025 by edmundmiller • Draft
1
@edmundmiller
8
WIP: Capture all comments in parser
#6332 opened Aug 7, 2025 by ErikDanielsson • Draft
2
Add s3 checksum algorithm storage/aws
#6321 opened Jul 31, 2025 by jorgee • Draft 26.04
1
Use ECS properties instead of container properties executor/aws-batch
#6270 opened Jul 11, 2025 by jorgee Loading…
1
17
Prevent using Azure Low Priority VMs when using Batch Managed mode
#6267 opened Jul 10, 2025 by adamrtalbot • Draft
1
@adamrtalbot
5
Include support for git-remote-s3 software/git
#6260 opened Jul 9, 2025 by jorgee Loading…
5 tasks done
9
Ignore secrets in stub run
#6256 opened Jul 7, 2025 by bentsherman • Draft
1
1
Add SQLite based cache store
#6255 opened Jul 6, 2025 by pditommaso • Draft
1
4
ProTip! no:milestone will show everything without a milestone.