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Pull requests: nextflow-io/nextflow

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Pull requests list

♻️ refactor(cli): add -with-seqera and SEQERA_ACCESS_TOKEN as aliases for nextflow run
#6168 opened Jun 5, 2025 by kenibrewer Loading…
1
Remove path hash in the conda environment software/conda
#6166 opened Jun 5, 2025 by jorgee Loading…
1
2
AWS SDK V2 Porting (without AWS NIO SPI)
#6165 opened Jun 5, 2025 by jorgee • Draft
1
Migration guide for workflow outputs docs
#6162 opened Jun 5, 2025 by bentsherman Loading…
21
feat: Azure Batch eagerly terminates jobs after all tasks have been submitted executor/azure-batch
#6159 opened Jun 4, 2025 by adamrtalbot Loading…
1
6
Add pixi support
#6157 opened Jun 3, 2025 by edmundmiller • Draft
@edmundmiller
1
Allow users to provide implicit managed identity to Azure Batch when pool identity is set to true
#6144 opened May 30, 2025 by adamrtalbot Loading…
5
Ensure that groupKey objects are treated as their groupTarget for the purposes of joins and combines
#6139 opened May 29, 2025 by robsyme Loading…
13
Use Priority to override existing executor plugins
#6135 opened May 28, 2025 by Lehmann-Fabian Loading…
4
Aws sdk v2 nio
#6126 opened May 27, 2025 by jorgee • Draft
1
2
Include retries in git repo requests software/git
#6121 opened May 26, 2025 by jorgee Loading…
1
11
Created GHA workflow for sca scan security
#6117 opened May 23, 2025 by arnaualcazar Loading…
@arnaualcazar
2
Fix hashing of directories cache-breaking Changes that will break everyone's task cache
#6113 opened May 22, 2025 by rcannood Loading…
1
8
POC: Global Cache
#6100 opened May 19, 2025 by jorgee • Draft
1
POC: Support pipeline archives instead of git repos or local paths software/git
#6093 opened May 16, 2025 by adamrtalbot • Draft
2
Refactor lineage JSON serialization with a root element including version, kind and spec properties
#6075 opened May 14, 2025 by jorgee Loading…
5
Include WorkflowMetadata in lineage records
#6069 opened May 13, 2025 by jorgee • Draft
1 task
3
Solve queueSize exceeded when using job arrays
#6047 opened May 7, 2025 by jorgee Loading…
1
8
Fix config for Trace level logging within the ConfigBuilder class
#6040 opened May 6, 2025 by kdesnos Loading…
6
Update plugins documentation docs plugins
#6033 opened May 5, 2025 by christopher-hakkaart Loading…
@bentsherman
24
Make timestamps ISO compliant
#6013 opened Apr 28, 2025 by pditommaso • Draft
2
Remove URL fragment in lineage IDs
#6011 opened Apr 25, 2025 by bentsherman • Draft 25.10
17
Fix: Allow running pipelines from local file:/ Git repositories in offline mode
#6007 opened Apr 24, 2025 by nz-mtra Loading…
1
1
Fix stack overflow error with workflow metadata
#5988 opened Apr 19, 2025 by bentsherman Loading…
1
2
Solve issue with losing track of SLURM jobs using cephfs executor/slurm
#5976 opened Apr 15, 2025 by riederd Loading…
5
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