capture exception before raising IndicatorColumnError (#49) #237

	name: Unit tests

	on:
	push:
	branches: ['**']
	pull_request:
	branches: ['**']

	jobs:
	build:
	runs-on: ${{ matrix.os }}
	strategy:
	matrix:
	os: [ubuntu-latest]
	python-version: [3.7, 3.8]

	services:
	postgres:
	image: postgres
	env:
	POSTGRES_DB: neurobooth
	POSTGRES_USER: neuroboother
	POSTGRES_PASSWORD: neuroboothrocks
	options: >-
	--health-cmd pg_isready
	--health-interval 10s
	--health-timeout 5s
	--health-retries 5
	ports:
	# Maps tcp port 5432 on service container to the host
	- 5432:5432

	steps:
	- uses: actions/checkout@v2
	- uses: conda-incubator/setup-miniconda@v2
	with:
	activate-environment: test
	python-version: ${{ matrix.python-version }}
	- name: Install dependencies
	shell: bash -el {0}
	# XXX: for some reason pandas does not install numpy automatically
	run: \|
	python -m pip install --upgrade pip
	conda install pandas
	pip install pytest pytest-cov
	- name: Install neurobooth-terra
	shell: bash -el {0}
	run: \|
	python setup.py --verbose install
	- name: Test with pytest
	shell: bash -el {0}
	run: \|
	python -m py.test . --cov=neurobooth_terra neurobooth_terra/tests/ --cov-report=xml

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