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name: MacOS Conda | ||
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on: | ||
pull_request: | ||
branches: | ||
- master | ||
- dev | ||
push: | ||
branches: [ master ] | ||
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jobs: | ||
build-macos-conda: | ||
runs-on: macos-latest | ||
strategy: | ||
max-parallel: 5 | ||
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steps: | ||
- uses: actions/checkout@v3 | ||
- name: Set up Python '3.10' | ||
uses: actions/setup-python@v3 | ||
with: | ||
python-version: '3.10' | ||
- name: Add conda to system path | ||
run: | | ||
# $CONDA is an environment variable pointing to the root of the miniconda directory | ||
echo $CONDA/bin >> $GITHUB_PATH | ||
- name: Install mamba | ||
run: | | ||
conda install -c conda-forge mamba | ||
conda clean -a | ||
# - name: install caiman | ||
# run: | | ||
# mamba install -c conda-forge caiman | ||
- name: install mesmerize-core | ||
run: | | ||
mamba env update -n base --file environment.yml | ||
caimanmanager.py install | ||
pip install . | ||
- name: Test with pytest | ||
run: | | ||
DOWNLOAD_GROUND_TRUTHS=1 pytest -s . | ||