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2022-08-11.build6275
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@azat-badretdin azat-badretdin released this 15 Aug 14:02
· 115 commits to master since this release
2022-08-11.build6275
bd40b1d

Used: PGAP 6.2

This release is based on PGAP-6.2. It includes the following features and bug fixes:

  • Update to the structural annotation algorithm: increased trust in HMM alignments resulting in better choice of start sites
  • Lowering of the acceptance criteria for ab initio hypothetical ORFs from 45 aa to 40 aa
  • Update tRNAScan-SE from v.2.0.7 to 2.0.9
  • Fixed handling some FASTA modifiers github issue 210
  • Support apptainer - new singularity
  • Fixed support of home directory installation for Windows users
  • Updated align_filter usage in CWL

Third Party Software Versions Used

  • tRNAScan-SE v.2.0.9
  • hmmer v.3.1b2
  • CRISPR v.1.02
  • AntiFam v.3.0
  • Rfam v.14.4
  • GeneMarkS-2 v.1.14_1.25
Assets 2
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