Pull request #675: Collections update - fixed gz and zip functionalit…

…y and collections parsing. Merge in STRUC/icn3d from release3401 to master * commit 'ae3356bbdcfe8350156dbfdeca26aa49b187726a': Collections update - fixed gz and zip functionality and collections parsing. Collections update - fix gz and zip functionality and collections parsing. Collections update - append structures, clear commands, and example folder fix Collections update - multi format zip, export, gz Collections update - multi format zip, export, gz Collections update - multi format zip, export, gz
ncbi · Jan 8, 2025 · d486fed · d486fed
2 parents 6fafba0 + ae3356b
commit d486fed
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -1,7 +1,11 @@
 ## Change Log
+[icn3d-3.40.2](https://www.ncbi.nlm.nih.gov/Structure/icn3d/icn3d-3.40.2.zip) was release on January 8, 2024. Collections update - fixed gz and zip functionality and collections parsing.
+
+[icn3d-3.40.1](https://www.ncbi.nlm.nih.gov/Structure/icn3d/icn3d-3.40.1.zip) was release on December 20, 2024. Collections update - added strucure append and clear commands, fix collections example directory.
+
 [icn3d-3.40.0](https://www.ncbi.nlm.nih.gov/Structure/icn3d/icn3d-3.40.0.zip) was release on December 11, 2024. Added the feature to show 2D Depiction/Diagram for chemical view with cid or smiles as input via the menu "Analysis > 2D Depiction"; fixed the positions of point lights relative to the camera.
 
-[icn3d-3.39.0](https://www.ncbi.nlm.nih.gov/Structure/icn3d/icn3d-3.39.0.zip) was release on December 2, 2024. Collections update - added multi file format support for zip, command history and JSON export, gz&ent file support.
+[icn3d-3.39.0](https://www.ncbi.nlm.nih.gov/Structure/icn3d/icn3d-3.39.0.zip) was release on November 25, 2024. Collections update - added multi file format support for zip, command history and JSON export, gz&ent file support.
 
 [icn3d-3.38.1](https://www.ncbi.nlm.nih.gov/Structure/icn3d/icn3d-3.38.1.zip) was release on November 14, 2024. Improved the conversion of chemical SMILES to 3D structure by showing double bonds.
 

diff --git a/build/icn3d.js b/build/icn3d.js
diff --git a/build/icn3d.min.js b/build/icn3d.min.js
diff --git a/build/icn3d.module.js b/build/icn3d.module.js
diff --git a/dist/CHANGELOG.md b/dist/CHANGELOG.md
@@ -1,7 +1,11 @@
 ## Change Log
+[icn3d-3.40.2](https://www.ncbi.nlm.nih.gov/Structure/icn3d/icn3d-3.40.2.zip) was release on January 8, 2024. Collections update - fixed gz and zip functionality and collections parsing; .
+
+[icn3d-3.40.1](https://www.ncbi.nlm.nih.gov/Structure/icn3d/icn3d-3.40.1.zip) was release on December 20, 2024. Collections update - added strucure append and clear commands, fix collections example directory.
+
 [icn3d-3.40.0](https://www.ncbi.nlm.nih.gov/Structure/icn3d/icn3d-3.40.0.zip) was release on December 11, 2024. Added the feature to show 2D Depiction/Diagram for chemical view with cid or smiles as input via the menu "Analysis > 2D Depiction"; fixed the positions of point lights relative to the camera.
 
-[icn3d-3.39.0](https://www.ncbi.nlm.nih.gov/Structure/icn3d/icn3d-3.39.0.zip) was release on December 2, 2024. Collections update - added multi file format support for zip, command history and JSON export, gz&ent file support.
+[icn3d-3.39.0](https://www.ncbi.nlm.nih.gov/Structure/icn3d/icn3d-3.39.0.zip) was release on November 25, 2024. Collections update - added multi file format support for zip, command history and JSON export, gz&ent file support.
 
 [icn3d-3.38.1](https://www.ncbi.nlm.nih.gov/Structure/icn3d/icn3d-3.38.1.zip) was release on November 14, 2024. Improved the conversion of chemical SMILES to 3D structure by showing double bonds.
 

diff --git a/dist/full.html b/dist/full.html
@@ -19,11 +19,11 @@
   <div id="div0"></div>
 
   <link rel="stylesheet" href="lib/jquery-ui-1.13.2.min.css">
-  <link rel="stylesheet" href="icn3d_3.40.0.css">
+  <link rel="stylesheet" href="icn3d_3.40.2.css">
   <script src="lib/jquery-3.5.0.min.js"></script>
   <script src="lib/jquery-ui-1.13.2.min.js"></script>
   <script src="lib/three_0.151.0.min.js"></script>
-  <script src="icn3d_3.40.0.min.js"></script>
+  <script src="icn3d_3.40.2.min.js"></script>
 
   <script type="text/javascript">
 
@@ -41,7 +41,7 @@
           alert("IE does NOT work with the current iCn3D version 3. The old iCn3D version 2 is used instead.");
       }
       else {
-          //$.getScript('icn3d_3.40.0.min.js', function() {
+          //$.getScript('icn3d_3.40.2.min.js', function() {
             var version = 3;
             await launchIcn3d(version); //await 
           //});

diff --git a/dist/full2.html b/dist/full2.html
@@ -20,11 +20,11 @@
   <div id="div1" style="float:left;"></div>
 
   <link rel="stylesheet" href="lib/jquery-ui-1.13.2.min.css">
-  <link rel="stylesheet" href="icn3d_3.40.0.css">
+  <link rel="stylesheet" href="icn3d_3.40.2.css">
   <script src="lib/jquery-3.5.0.min.js"></script>
   <script src="lib/jquery-ui-1.13.2.min.js"></script>
   <script src="lib/three_0.151.0.min.js"></script>
-  <script src="icn3d_3.40.0.min.js"></script>
+  <script src="icn3d_3.40.2.min.js"></script>
 
   <script type="text/javascript">
     $( document ).ready(async function() {
@@ -41,7 +41,7 @@
           alert("IE does NOT work with the current iCn3D version 3. The old iCn3D version 2 is used instead.");
       }
       else {
-          //$.getScript('icn3d_3.40.0.min.js', function() {
+          //$.getScript('icn3d_3.40.2.min.js', function() {
             var version = 3;
             await launchIcn3d(version);
           //});

diff --git a/dist/full2_3.40.0.html → dist/full2_3.40.2.html b/dist/full2_3.40.0.html → dist/full2_3.40.2.html
@@ -20,11 +20,11 @@
   <div id="div1" style="float:left;"></div>
 
   <link rel="stylesheet" href="lib/jquery-ui-1.13.2.min.css">
-  <link rel="stylesheet" href="icn3d_3.40.0.css">
+  <link rel="stylesheet" href="icn3d_3.40.2.css">
   <script src="lib/jquery-3.5.0.min.js"></script>
   <script src="lib/jquery-ui-1.13.2.min.js"></script>
   <script src="lib/three_0.151.0.min.js"></script>
-  <script src="icn3d_3.40.0.min.js"></script>
+  <script src="icn3d_3.40.2.min.js"></script>
 
   <script type="text/javascript">
     $( document ).ready(async function() {
@@ -41,7 +41,7 @@
           alert("IE does NOT work with the current iCn3D version 3. The old iCn3D version 2 is used instead.");
       }
       else {
-          //$.getScript('icn3d_3.40.0.min.js', function() {
+          //$.getScript('icn3d_3.40.2.min.js', function() {
             var version = 3;
             await launchIcn3d(version);
           //});

diff --git a/dist/full_3.40.0.html → dist/full_3.40.2.html b/dist/full_3.40.0.html → dist/full_3.40.2.html
@@ -19,11 +19,11 @@
   <div id="div0"></div>
 
   <link rel="stylesheet" href="lib/jquery-ui-1.13.2.min.css">
-  <link rel="stylesheet" href="icn3d_3.40.0.css">
+  <link rel="stylesheet" href="icn3d_3.40.2.css">
   <script src="lib/jquery-3.5.0.min.js"></script>
   <script src="lib/jquery-ui-1.13.2.min.js"></script>
   <script src="lib/three_0.151.0.min.js"></script>
-  <script src="icn3d_3.40.0.min.js"></script>
+  <script src="icn3d_3.40.2.min.js"></script>
 
   <script type="text/javascript">
 
@@ -41,7 +41,7 @@
           alert("IE does NOT work with the current iCn3D version 3. The old iCn3D version 2 is used instead.");
       }
       else {
-          //$.getScript('icn3d_3.40.0.min.js', function() {
+          //$.getScript('icn3d_3.40.2.min.js', function() {
             var version = 3;
             await launchIcn3d(version); //await 
           //});

diff --git a/dist/icn3d-3.40.0.zip → dist/icn3d-3.40.2.zip b/dist/icn3d-3.40.0.zip → dist/icn3d-3.40.2.zip