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Interactions API #377

Merged
merged 45 commits into from
Nov 17, 2023
Merged

Interactions API #377

merged 45 commits into from
Nov 17, 2023

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mjrosengrant
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  • Add new Interactions module to API for persistent interaction lines.

  • Add workspace_updated callback for update_workspace calls

  • Add current_molecule and current_conformer properties to Complex

@mjrosengrant mjrosengrant requested a review from ajm13 November 17, 2023 16:02
ajm13
ajm13 approved these changes Nov 17, 2023
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nanome/api/interactions/interaction.py Outdated Show resolved Hide resolved
nanome/api/structure/complex.py Outdated Show resolved Hide resolved
nanome/util/enums.py Outdated Show resolved Hide resolved
testing/test_plugins/InteractionTestAsync.py Outdated Show resolved Hide resolved
Ramjii and others added 28 commits November 17, 2023 15:52
@Ramjii @mjrosengrant
Interaction API first step
3b5ab60
@mjrosengrant
verify Interaction test works
ce0b9a0
@mjrosengrant
add AsyncInteractionsTest
51cca29
@mjrosengrant
make args optional for InteractionLine definition
5e768a2
@mjrosengrant
updates
cea79c1
@mjrosengrant
-1
8e16718
@Ramjii @mjrosengrant
Add atom groups to interactions, remove color, add all kinds from che…
f3c24ec 
…m interaction
@mjrosengrant
add AsyncInteractionsTest
4c09fe9
@mjrosengrant
make args optional for InteractionLine definition
a2c182a
@mjrosengrant
done callback needs to be optional
fbc0315
@mjrosengrant
fix callback functions in interactions
0b28484
@mjrosengrant
fix upload_multiple
6f1a9ac
@Ramjii @mjrosengrant
bump serializers version and add visible bool
00df395
@mjrosengrant
don't error out when interaction re-uploaded
0455c14
@mjrosengrant
add section to test toggling visibility
1fa2dd8
@mjrosengrant
update interactions test
72abd97
@mjrosengrant
refactor test plugin
fa3781e
@mjrosengrant
Make plugin into a TestCase
c18dbdc
@mjrosengrant
reorder functions, add traceback to results
795f9c9
@mjrosengrant
fix InteractionTestAsync
dad164e
@mjrosengrant
fix timing issue
d71782c
@mjrosengrant
make plugin class import more resilient
95714ac
@mjrosengrant
Revert "make plugin class import more resilient"
f8ea6e9 
This reverts commit f60fbf4.
@mjrosengrant
expose plugin network version table
b983455
@Ramjii @mjrosengrant
Add run interactions
fd5cc1e
@Ramjii @mjrosengrant
Oops
11754e1
@mjrosengrant
update debug message
0c1a43a
@mjrosengrant
autopep8
5496c54
mjrosengrant and others added 17 commits November 17, 2023 15:53
@mjrosengrant mjrosengrant merged commit ba44d0a into master Nov 17, 2023
10 checks passed
@mjrosengrant mjrosengrant deleted the interaction-api branch November 17, 2023 22:10
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@ajm13 ajm13 ajm13 approved these changes

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3 participants
@mjrosengrant @ajm13 @Ramjii