Getting Started on AnVIL

This book was created from this github template.

You can see the rendered book here: https://jhudatascience.org/AnVIL_Book_Getting_Started/

If you would like to contribute to this book, take a look at the getting_started.md.

About this book

This book is part of a series of books for the NHGRI’s Genomic Data Science Analysis, Visualization, and Informatics Lab-space (AnVIL). Here, we present opinionated step-by-step guides for setting up accounts focused on three personas: PIs, Analysts, and Consortia. Additional guides are provided to help you with Workspaces, launch interactive tools, and start working with data. Learn more about AnVIL by visiting https://anvilproject.org or reading the preprint.

Learning Objectives

This book will teach learners to:

• Set up accounts on AnVIL
• Use AnVIL Workspaces to run common genomics tools including Galaxy, RStudio, and Jupyter Notebooks
• Access data on AnVIL

Other books in this series

• Using AnVIL in the Classroom
• Analysis Exercises Using AnVIL
• Galaxy on AnVIL

Encountering problems?

If you are encountering any problems with this book, please file a GitHub issue or create a post on Discourse.

All materials in this book are licensed under a Creative Commons Attribution 4.0 International License unless noted otherwise.