Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add a few non-human animal genetic diseases #7949

Closed
wants to merge 1 commit into from

Conversation

katiermullen
Copy link
Collaborator

Addresses #7271

@sabrinatoro please review this draft PR.

Note: In the ROBOT template for these terms, in order to avoid a ROBOT MANCHESTER PARSE ERROR, I had to use the gene symbol (e.g. CHAT) rather than the gene ID (e.g. NCBIGene:486775).

In the gene list on Mondo, there are two CHAT entries - http://identifiers.org/hgnc/1912 and http://identifiers.org/ncbigene/486775. Is this a problem? They are orthologs, but should the non-human animal terms only point to the ncbigene entries?

Thank you!

@sabrinatoro
Copy link
Collaborator

sabrinatoro commented Jul 22, 2024

In the gene list on Mondo, there are two CHAT entries - http://identifiers.org/hgnc/1912 and http://identifiers.org/ncbigene/486775. Is this a problem? They are orthologs, but should the non-human animal terms only point to the ncbigene entries?

We need to make sure that the gene points to the non-human animal term. Since gene symbols can be the same between human and non-human animal, we should not use the gene symbols.
Instead of using the gene symbol, you can use the IRI for the gene, ie http://identifiers.org/ncbigene/486775

Please see #7987 for more details

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants