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filter validity
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Marcus D. R. Klarqvist committed Sep 11, 2017
1 parent 0148824 commit 4ce011a
Showing 1 changed file with 10 additions and 10 deletions.
20 changes: 10 additions & 10 deletions src/tomahawk/TomahawkImportWriter.h
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Original file line number Diff line number Diff line change
Expand Up @@ -220,7 +220,7 @@ class TomahawkImportWriter {
}

const U64 n_runs = (this->buffer_rle_.pointer - rle_start_pos)/this->rleController_->getBitWidth();
const TomahawkEntryMetaBase& test = *reinterpret_cast<const TomahawkEntryMetaBase* const>(&this->buffer_meta_[meta_start_pos]);
const TomahawkEntryMetaBase& base_meta = *reinterpret_cast<const TomahawkEntryMetaBase* const>(&this->buffer_meta_[meta_start_pos]);

if(n_runs == 1){
this->buffer_meta_.pointer = meta_start_pos; // reroll back
Expand All @@ -229,17 +229,17 @@ class TomahawkImportWriter {
return false;
}

if(test.HWE_P < this->filter.HWE_P){
if(base_meta.HWE_P < this->filter.HWE_P){
this->buffer_meta_.pointer = meta_start_pos; // reroll back
this->buffer_rle_.pointer = rle_start_pos; // reroll back
//std::cerr << "HWE_P < " << this->filter.HWE_P << ": " << test.HWE_P << '\t' << test << std::endl;
//std::cerr << "HWE_P < " << this->filter.HWE_P << ": " << base_meta.HWE_P << '\t' << base_meta << std::endl;
return false;
}

if(test.MAF < this->filter.MAF){
if(base_meta.MAF < this->filter.MAF){
this->buffer_meta_.pointer = meta_start_pos; // reroll back
this->buffer_rle_.pointer = rle_start_pos; // reroll back
//std::cerr << "MAF < " << this->filter.MAF << ": " << test.MAF << '\t' << test << std::endl;
//std::cerr << "MAF < " << this->filter.MAF << ": " << base_meta.MAF << '\t' << base_meta << std::endl;
return false;
}

Expand All @@ -262,25 +262,25 @@ class TomahawkImportWriter {
}

const U64 n_runs = (this->buffer_rle_.pointer - rle_start_pos)/this->rleController_->getBitWidth();
const TomahawkEntryMetaBase& test = *reinterpret_cast<const TomahawkEntryMetaBase* const>(&this->buffer_meta_[meta_start_pos]);
const TomahawkEntryMetaBase& base_meta = *reinterpret_cast<const TomahawkEntryMetaBase* const>(&this->buffer_meta_[meta_start_pos]);

if(n_runs == 1){
this->buffer_meta_.pointer = meta_start_pos; // reroll back
this->buffer_rle_.pointer = rle_start_pos; // reroll back
return false;
}

if(test.HWE_P < this->filter.HWE_P){
if(base_meta.HWE_P < this->filter.HWE_P){
this->buffer_meta_.pointer = meta_start_pos; // reroll back
this->buffer_rle_.pointer = rle_start_pos; // reroll back
//std::cerr << "HWE_P < " << this->filter.HWE_P << ": " << test.HWE_P << std::endl;
//std::cerr << "HWE_P < " << this->filter.HWE_P << ": " << base_meta.HWE_P << std::endl;
return false;
}

if(test.MAF < this->filter.MAF){
if(base_meta.MAF < this->filter.MAF){
this->buffer_meta_.pointer = meta_start_pos; // reroll back
this->buffer_rle_.pointer = rle_start_pos; // reroll back
//std::cerr << "MAF < " << this->filter.MAF << ": " << test.MAF << std::endl;
//std::cerr << "MAF < " << this->filter.MAF << ": " << base_meta.MAF << std::endl;
return false;
}

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