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minsiksudo/README.md

Bioprocess Analytics and Genomics Engineering Lab (BAGEL)

Minsik Kim's lab at Inha University

About me

Short blurb

  • 👋 Hi, I’m Minsik Kim (@minsiksudo), PI of the Bioprocess Analytics and Genomics Engineering Lab (BAGEL) at Inha University.
  • 🧪 As a bioprocess engineer and bioinformatician, I am trying to link metagenomic sequencing data with bioprocess research.
  • 📖 + this page contains lecture materials for BTE3207 (Advanced Biostatistics) and IBS7048 (Advanced Metagenomics).

About the lab

Research

  • 👀 BAGLE at Inha focuses on the following keywords: Bioprocesses; Microalgae; Techno-economic assessments; Pahtogens; Wastewater; Amplicon sequencing; Shot-gun metagenomics; Environmental microbiome; Asthma
  • 💻 Currently, we are looking for the best method/statistical model for clustered/longitudinal shotgun sequencing data, to be used for environmental applications

Contacts

  • 🔬 Our lab is always seeking co-work opportunities and recruiting aspiring M.S. and Ph.D. applicants. Please feel free to contact me if you need any further information.
  • 📫 How to reach me by email [email protected]
  • 📞 How to reach me by phone +82-32-860-7515
  • 🏠 How to visit me 2S119, Inha University, 100 Inha St., Incheon 22212, Korea

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  1. BTE3207_Advanced_Biostatistics BTE3207_Advanced_Biostatistics Public

    This is a GitHub page for BTE3207 at Inha University

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  2. IBS7048_Advanced_metagenomics IBS7048_Advanced_metagenomics Public

    Lecture notes for Advanced metagenomics (IBS7048) at Inha University

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  3. lailab_phyloseq lailab_phyloseq Public

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  4. STAMPS2022_Minsik STAMPS2022_Minsik Public

    R

  5. lai_lab_host_depletion lai_lab_host_depletion Public

    Host DNA depletion experiment

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