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µManager

Micro-Manager

Micro-Manager started out as an application to control microscope hardware, such as cameras, xy-stages, filter wheels, etc. It includes a hardware abstraction layer written in C++ that is now used in several projects including the original user interface written in Java that is distributed as an ImageJ plugin.

Go to micro-manager.org for documentation and binary downloads.

For support, see Micro-Manager Community.

The Micro-Manager community welcomes you! For our governance structures, go here

Repositories

Python compatility

Several projects provide access to Micro-Manager code from Python. Pycro-manager creates an interprocess bridge between the "classical" Micro-Manger running in a Java Virtual Machine and Python. Pymmcore exports the MMCore interface directly to Python. Pymmcore is used by various Python packages such as pymmcore-plus, located in a github organization that contains several User Interfaces witten in Python to interface with MMCore (pymmcore-widgets, napari-micro-manager).

Contributing

Start here.

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  1. micro-manager micro-manager Public

    Microscope control and image acquisition integrated with ImageJ

    Java 275 235

  2. pycro-manager pycro-manager Public

    Python control of micro-manager for customized data acquisition

    Jupyter Notebook 169 53

  3. mmCoreAndDevices mmCoreAndDevices Public

    Micro-Manager's device control layer, written in C++

    C++ 51 114

  4. micro-manager.github.io micro-manager.github.io Public

    Micro-Manager website source

    JavaScript 7 47

  5. pymmcore pymmcore Public

    Python bindings for MMCore, Micro-Manager's device control layer

    Python 35 10

  6. futureMMCore futureMMCore Public

    Place to discuss the future design of a universal microscope hardware interface

    15 1

Repositories

Showing 10 of 22 repositories

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