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Remove Jupyter notebook test file and refactor backup-related tests i… #3

Remove Jupyter notebook test file and refactor backup-related tests i…

Remove Jupyter notebook test file and refactor backup-related tests i… #3

Workflow file for this run

# FILE: .github/workflows/test.yaml
name: Run software tests
on:
push:
pull_request:
branches:
- main
jobs:
test:
name: Run tests
runs-on: ubuntu-latest
steps:
- name: Checkout repository
uses: actions/checkout@v4
- name: Setup Conda
uses: conda-incubator/setup-miniconda@v3
with:
miniforge-variant: Miniforge3
miniforge-version: latest
activate-environment: test_env
use-mamba: true
python-version: "3.9"
channels: conda-forge
channel-priority: strict
conda-remove-defaults: true
- name: Cache conda env
uses: actions/cache@v3
with:
path: |
${{ env.CONDA }}/envs/test_env
${{ env.CONDA }}/pkgs
key: conda-${{ runner.os }}-${{ hashFiles('pyproject.toml') }}
restore-keys: |
conda-${{ runner.os }}-
- name: Install dependencies
shell: bash -l {0}
run: |
# Install dependencies from pyproject.toml
mamba install -y -c conda-forge \
tomlkit \
requests \
tqdm \
pandas \
pytest \
make \
pip
- name: Install package
shell: bash -l {0}
run: |
pip install -e .
- name: Run tests
shell: bash -l {0}
run: |
make test