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added 30 commits
October 7, 2025 01:59
…prehensive project updates
This commit re-introduces and consolidates a series of significant updates
to the project, focusing on secure credential management, enhanced Nix tooling,
and updated documentation. This commit effectively re-applies changes that
were previously undone by `git reset`.
Key changes include:
- **SOP Update:** Added a new section to `docs/sops/SOP_Secure_Credential_Handling_in_Nix_Scripts.md`
detailing Makefile integration for sops-nix workflows.
- **Script Enhancement:** Modified `scripts/create_gemini_sops_secrets.sh` to explicitly
pass the GPG key fingerprint to `sops` for encryption, resolving previous issues.
- **Troubleshooting Makefile:** Introduced `Makefile.sops-noob` with targets to
assist users in verifying GPG key setup and testing sops encryption.
- **New Flake for Integration:** Created `flakes/test-gemini-secrets/` containing a
Nix flake that demonstrates how to integrate sops-managed secrets with the
`gemini-cli`. This includes a `decryptedSopsSecrets` derivation and a
`geminiCliWithSecrets` wrapper.
- **Makefile Target:** Added a `run-gemini-with-sops` target to the main `Makefile`
to easily execute `gemini-cli` with the securely managed credentials via the
new `test-gemini-secrets` flake.
- **Generated Files:** Included the generated `secrets.nix` and `sops-secrets/`
directory (containing encrypted files) as part of the secure setup.
- **Security Enhancement:** Explicitly removed `sops-secrets/google_accounts.json`
and `sops-secrets/settings.json` from Git tracking and updated `.gitignore`
to permanently exclude the `sops-secrets/` directory.
- **Documentation Updates:**
- Added `10/06/status.md` with a comprehensive project status update.
- Added `docs/sops/UV2NIX_CODE_SUMMARY.md` summarizing `uv2nix` codebase.
- **Other File Modifications:** Re-applied various modifications to existing files
such as `Makefile`, `flake.nix`, `GEMINI.md`, and several Nix files under `09/`
and `github_graphql_parts/`, reflecting ongoing development.
This commit renames the `test-gemini-secrets` flake to `wrap-gemini-secrets` to better reflect its purpose as a wrapper for `gemini-cli` with sops-managed secrets. Key changes include: - Renamed the directory `flakes/test-gemini-secrets/` to `flakes/wrap-gemini-secrets/`. - Updated all references to the flake in `Makefile` and `09/25/NixTikTok.Makefile`.
…nces This commit restores the direct integration of Gemini CLI without sops for now, while also updating all `gemini-cli.url` references to a consistent branch. Key changes: - **`gemini-cli.url` Updates:** All references to `gemini-cli.url` across various Nix files have been updated to `github:meta-introspector/gemini-cli?ref=feature/CRQ-016-nixify-2025-10-06` to ensure consistency and resolve flake fetching issues. - **`09/25/NixTikTok.Makefile` Restoration:** The `make_make_prompt_prompt` target has been restored to its original non-sops integrated state, and the temporary `make_prompt_no_sops` target has been removed. - **`09/25/gemini-prompt-builder.sh` Modification:** The script now copies actual `~/.gemini` credential files from the host system into the Nix build sandbox, allowing `gemini-cli` to find its configuration. - **Gemini Test Lattice Document:** Created `docs/qa/Gemini_Test_Lattice.md` to provide a central overview of impure Gemini-related Nix files, their purpose, impurity characteristics, and integration details.
…ration
This commit introduces a foundational "lattice of flakes" architecture,
abstracting common features into composable Nix flakes, and refines the
integration of Gemini CLI with credential management.
Key changes include:
- **Nix Flake Feature Lattice:**
- Created atomic feature flakes (feature-2-nix-base, feature-3-home-dir-creds,
feature-5-oauth-creds, feature-7-telemetry-capture,
feature-11-llm-output-capture, feature-13-makefile-input,
feature-17-yolo-approval, feature-19-self-source-input), each encapsulating
a distinct functionality.
- Constructed composite flakes (e.g., composite-2-3-nix-base-home-creds)
by combining these atomic features, demonstrating composability and
building a lattice structure.
- Fixed `statix` warnings (W04) in all new feature flakes by changing
`lib = pkgs.lib;` to `inherit lib;`.
- **Gemini CLI Integration Refinement:**
- **`gemini-cli.url` Updates:** All references to `gemini-cli.url` across various
Nix files have been updated to `github:meta-introspector/gemini-cli?ref=feature/CRQ-016-nixify-2025-10-06`
to ensure consistency and resolve flake fetching issues.
- **`09/25/NixTikTok.Makefile` Restoration:** The `make_make_prompt_prompt` target
has been restored to its original non-sops integrated state, and the temporary
`make_prompt_no_sops` target has been re-added, providing both sops and non-sops
options for Gemini CLI interaction.
- **`09/25/gemini-prompt-builder.sh` Modification:** The script now copies actual
`~/.gemini` credential files from the host system into the Nix build sandbox,
allowing `gemini-cli` to find its configuration.
- **`shellcheck` Fix:** Corrected `SC2168` warning in `09/25/gemini-prompt-builder.sh`
by removing the `local` keyword from `TEMP_HOME` declaration.
- **SOPS Integration Experiment Relocation:**
- The `sops`-related Gemini CLI integration experiment (including
`flakes/wrap-gemini-secrets`, `secrets.nix`, `sops-secrets/`, `Makefile.sops-noob`)
has been moved to `10/06/sops-gemini/` for later refinement.
- The main `Makefile`'s `run-gemini-with-sops` target has been updated to
reflect the new location of the `wrap-gemini-secrets` flake and to implement
the "decrypt outside, copy in" strategy for sops secrets.
- **Documentation:** Created `docs/qa/Gemini_Test_Lattice.md` to provide a central
overview of impure Gemini-related Nix files, their purpose, impurity characteristics,
and integration details, including feature vector mappings.
- **Plan Document:** Created `10/07/plan.md` outlining the strategy for developing
new flakes with specific feature vectors and clarifying the "YOLO Approval Model".
- **Nix Monster Encoding:** Created `10/07/nix-monster-encoding.nix` to implement
the pure Nix encoding logic for mapping Nix structures to prime numbers.
…ration
This commit introduces a foundational "lattice of flakes" architecture,
abstracting common features into composable Nix flakes, and refines the
integration of Gemini CLI with credential management.
Key changes include:
- **Nix Flake Feature Lattice:**
- Created atomic feature flakes (feature-2-nix-base, feature-3-home-dir-creds,
feature-5-oauth-creds, feature-7-telemetry-capture,
feature-11-llm-output-capture, feature-13-makefile-input,
feature-17-yolo-approval, feature-19-self-source-input), each encapsulating
a distinct functionality.
- Constructed composite flakes (e.g., composite-2-3-nix-base-home-creds)
by combining these atomic features, demonstrating composability and
building a lattice structure.
- Fixed `statix` warnings (W04) in all new feature flakes by changing
`lib = pkgs.lib;` to `inherit lib;`.
- **Gemini CLI Integration Refinement:**
- **`gemini-cli.url` Updates:** All references to `gemini-cli.url` across various
Nix files have been updated to `github:meta-introspector/gemini-cli?ref=feature/CRQ-016-nixify-2025-10-06`
to ensure consistency and resolve flake fetching issues.
- **`09/25/NixTikTok.Makefile` Restoration:** The `make_make_prompt_prompt` target
has been restored to its original non-sops integrated state, and the temporary
`make_prompt_no_sops` target has been re-added, providing both sops and non-sops
options for Gemini CLI interaction.
- **`09/25/gemini-prompt-builder.sh` Modification:** The script now copies actual
`~/.gemini` credential files from the host system into the Nix build sandbox,
allowing `gemini-cli` to find its configuration.
- **`shellcheck` Fix:** Corrected `SC2168` warning in `09/25/gemini-prompt-builder.sh`
by removing the `local` keyword from `TEMP_HOME` declaration.
- **SOPS Integration Experiment Relocation:**
- The `sops`-related Gemini CLI integration experiment (including
`flakes/wrap-gemini-secrets`, `secrets.nix`, `sops-secrets/`, `Makefile.sops-noob`)
has been moved to `10/06/sops-gemini/` for later refinement.
- The main `Makefile`'s `run-gemini-with-sops` target has been updated to
reflect the new location of the `wrap-gemini-secrets` flake and to implement
the "decrypt outside, copy in" strategy for sops secrets.
- **Documentation:** Created `docs/qa/Gemini_Test_Lattice.md` to provide a central
overview of impure Gemini-related Nix files, their purpose, impurity characteristics,
and integration details, including feature vector mappings.
- **Plan Document:** Created `10/07/plan.md` outlining the strategy for developing
new flakes with specific feature vectors and clarifying the "YOLO Approval Model".
- **Nix Monster Encoding:** Created `10/07/nix-monster-encoding.nix` to implement
the pure Nix encoding logic for mapping Nix structures to prime numbers.
…ration
This commit introduces a foundational "lattice of flakes" architecture,
abstracting common features into composable Nix flakes, and refines the
integration of Gemini CLI with credential management.
Key changes include:
- **Nix Flake Feature Lattice:**
- Created atomic feature flakes (feature-2-nix-base, feature-3-home-dir-creds,
feature-5-oauth-creds, feature-7-telemetry-capture,
feature-11-llm-output-capture, feature-13-makefile-input,
feature-17-yolo-approval, feature-19-self-source-input), each encapsulating
a distinct functionality.
- Constructed composite flakes (e.g., composite-2-3-nix-base-home-creds)
by combining these atomic features, demonstrating composability and
building a lattice structure.
- Fixed `statix` warnings (W04) in all new feature flakes by changing
`lib = pkgs.lib;` to `inherit lib;`.
- **Gemini CLI Integration Refinement:**
- **`gemini-cli.url` Updates:** All references to `gemini-cli.url` across various
Nix files have been updated to `github:meta-introspector/gemini-cli?ref=feature/CRQ-016-nixify-2025-10-06`
to ensure consistency and resolve flake fetching issues.
- **`09/25/NixTikTok.Makefile` Restoration:** The `make_make_prompt_prompt` target
has been restored to its original non-sops integrated state, and the temporary
`make_prompt_no_sops` target has been re-added, providing both sops and non-sops
options for Gemini CLI interaction.
- **`09/25/gemini-prompt-builder.sh` Modification:** The script now copies actual
`~/.gemini` credential files from the host system into the Nix build sandbox,
allowing `gemini-cli` to find its configuration.
- **`shellcheck` Fix:** Corrected `SC2168` warning in `09/25/gemini-prompt-builder.sh`
by removing the `local` keyword from `TEMP_HOME` declaration.
- **SOPS Integration Experiment Relocation:**
- The `sops`-related Gemini CLI integration experiment (including
`flakes/wrap-gemini-secrets`, `secrets.nix`, `sops-secrets/`, `Makefile.sops-noob`)
has been moved to `10/06/sops-gemini/` for later refinement.
- The main `Makefile`'s `run-gemini-with-sops` target has been updated to
reflect the new location of the `wrap-gemini-secrets` flake and to implement
the "decrypt outside, copy in" strategy for sops secrets.
- **Documentation:** Created `docs/qa/Gemini_Test_Lattice.md` to provide a central
overview of impure Gemini-related Nix files, their purpose, impurity characteristics,
and integration details, including feature vector mappings.
- **Plan Document:** Created `10/07/plan.md` outlining the strategy for developing
new flakes with specific feature vectors and clarifying the "YOLO Approval Model".
- **Nix Monster Encoding:** Created `10/07/nix-monster-encoding.nix` to implement
the pure Nix encoding logic for mapping Nix structures to prime numbers.
Introduced `lib/code-generation/functor-matrix.nix` to establish a scaffold for generating Lean4 and Rust code from Nix expressions. This module defines placeholder functors for each AST node type, enabling future development of automated code generation for formal verification (Lean4) and high-performance execution (Rust). Also includes a placeholder for emoji-to-vernacular JSON conversion.
Introduced `lib/code-generation/functor-matrix.nix` to establish a scaffold for generating Lean4 and Rust code from Nix expressions. This module defines placeholder functors for each AST node type, enabling future development of automated code generation for formal verification (Lean4) and high-performance execution (Rust). Also includes a placeholder for emoji-to-vernacular JSON conversion.
Introduced `lib/code-generation/functor-matrix.nix` to establish a scaffold for generating Lean4 and Rust code from Nix expressions. This module defines placeholder functors for each AST node type, enabling future development of automated code generation for formal verification (Lean4) and high-performance execution (Rust). Also includes a placeholder for emoji-to-vernacular JSON conversion.
Introduced `lib/code-generation/functor-matrix.nix` to establish a scaffold for generating Lean4 and Rust code from Nix expressions. This module defines placeholder functors for each AST node type, enabling future development of automated code generation for formal verification (Lean4) and high-performance execution (Rust). Also includes a placeholder for emoji-to-vernacular JSON conversion.
Introduced `lib/code-generation/functor-matrix.nix` to establish a scaffold for generating Lean4 and Rust code from Nix expressions. This module defines placeholder functors for each AST node type, enabling future development of automated code generation for formal verification (Lean4) and high-performance execution (Rust). Also includes a placeholder for emoji-to-vernacular JSON conversion.
Introduced `lib/code-generation/functor-matrix.nix` to establish a scaffold for generating Lean4 and Rust code from Nix expressions. This module defines placeholder functors for each AST node type, enabling future development of automated code generation for formal verification (Lean4) and high-performance execution (Rust). Also includes a placeholder for emoji-to-vernacular JSON conversion.
Introduced `lib/code-generation/functor-matrix.nix` to establish a scaffold for generating Lean4 and Rust code from Nix expressions. This module defines placeholder functors for each AST node type, enabling future development of automated code generation for formal verification (Lean4) and high-performance execution (Rust). Also includes a placeholder for emoji-to-vernacular JSON conversion.
Introduced `lib/code-generation/functor-matrix.nix` to establish a scaffold for generating Lean4 and Rust code from Nix expressions. This module defines placeholder functors for each AST node type, enabling future development of automated code generation for formal verification (Lean4) and high-performance execution (Rust). Also includes a placeholder for emoji-to-vernacular JSON conversion.
Introduced `lib/code-generation/functor-matrix.nix` to establish a scaffold for generating Lean4 and Rust code from Nix expressions. This module defines placeholder functors for each AST node type, enabling future development of automated code generation for formal verification (Lean4) and high-performance execution (Rust). Also includes a placeholder for emoji-to-vernacular JSON conversion.
Introduced `lib/code-generation/functor-matrix.nix` to establish a scaffold for generating Lean4 and Rust code from Nix expressions. This module defines placeholder functors for each AST node type, enabling future development of automated code generation for formal verification (Lean4) and high-performance execution (Rust). Also includes a placeholder for emoji-to-vernacular JSON conversion.
Introduced `lib/code-generation/functor-matrix.nix` to establish a scaffold for generating Lean4 and Rust code from Nix expressions. This module defines placeholder functors for each AST node type, enabling future development of automated code generation for formal verification (Lean4) and high-performance execution (Rust). Also includes a placeholder for emoji-to-vernacular JSON conversion.
Introduced `lib/code-generation/functor-matrix.nix` to establish a scaffold for generating Lean4 and Rust code from Nix expressions. This module defines placeholder functors for each AST node type, enabling future development of automated code generation for formal verification (Lean4) and high-performance execution (Rust). Also includes a placeholder for emoji-to-vernacular JSON conversion.
Introduced `lib/code-generation/functor-matrix.nix` to establish a scaffold for generating Lean4 and Rust code from Nix expressions. This module defines placeholder functors for each AST node type, enabling future development of automated code generation for formal verification (Lean4) and high-performance execution (Rust). Also includes a placeholder for emoji-to-vernacular JSON conversion.
Introduced `lib/code-generation/functor-matrix.nix` to establish a scaffold for generating Lean4 and Rust code from Nix expressions. This module defines placeholder functors for each AST node type, enabling future development of automated code generation for formal verification (Lean4) and high-performance execution (Rust). Also includes a placeholder for emoji-to-vernacular JSON conversion.
Introduced `lib/code-generation/functor-matrix.nix` to establish a scaffold for generating Lean4 and Rust code from Nix expressions. This module defines placeholder functors for each AST node type, enabling future development of automated code generation for formal verification (Lean4) and high-performance execution (Rust). Also includes a placeholder for emoji-to-vernacular JSON conversion.
Introduced `lib/code-generation/functor-matrix.nix` to establish a scaffold for generating Lean4 and Rust code from Nix expressions. This module defines placeholder functors for each AST node type, enabling future development of automated code generation for formal verification (Lean4) and high-performance execution (Rust). Also includes a placeholder for emoji-to-vernacular JSON conversion.
Introduced `lib/code-generation/functor-matrix.nix` to establish a scaffold for generating Lean4 and Rust code from Nix expressions. This module defines placeholder functors for each AST node type, enabling future development of automated code generation for formal verification (Lean4) and high-performance execution (Rust). Also includes a placeholder for emoji-to-vernacular JSON conversion.
Introduced `lib/code-generation/functor-matrix.nix` to establish a scaffold for generating Lean4 and Rust code from Nix expressions. This module defines placeholder functors for each AST node type, enabling future development of automated code generation for formal verification (Lean4) and high-performance execution (Rust). Also includes a placeholder for emoji-to-vernacular JSON conversion.
Introduced `lib/code-generation/functor-matrix.nix` to establish a scaffold for generating Lean4 and Rust code from Nix expressions. This module defines placeholder functors for each AST node type, enabling future development of automated code generation for formal verification (Lean4) and high-performance execution (Rust). Also includes a placeholder for emoji-to-vernacular JSON conversion.
Introduced `lib/code-generation/functor-matrix.nix` to establish a scaffold for generating Lean4 and Rust code from Nix expressions. This module defines placeholder functors for each AST node type, enabling future development of automated code generation for formal verification (Lean4) and high-performance execution (Rust). Also includes a placeholder for emoji-to-vernacular JSON conversion.
Introduced `lib/code-generation/functor-matrix.nix` to establish a scaffold for generating Lean4 and Rust code from Nix expressions. This module defines placeholder functors for each AST node type, enabling future development of automated code generation for formal verification (Lean4) and high-performance execution (Rust). Also includes a placeholder for emoji-to-vernacular JSON conversion.
This commit introduces a new abstract mathematical model of the system, which is documented in CRQ 046. It also introduces the concept of proofs as smart contracts on a sidechain, which is documented in CRQ 047. The following changes are included: - New Nix files for agent portfolio, buy orders, Hydra P2P scheduler, IPFS publisher, and Nix to LLM conversion. - Updates to the derivation spokes, monad context, task generator, and OEIS solver. - A new Makefile target `lint-nix-unstaged` to allow linting of unstaged Nix files. - A new centralized module for managing the location of sops-secrets. - Fixes for the sops-secrets path issue.
This commit introduces a comprehensive framework for LLM resource optimization, autonomous task execution, and reproducible bootstrap processes. Key changes include: - LLM Quota & Usage Tracking: Implemented schemas and placeholder functions for tracking LLM API quotas and usage across various providers (Gemini, Groq, Amazon Q, GitHub Copilot, OpenAI Codex). - MiniZinc LLM Optimizer: Integrated a MiniZinc solver to determine the optimal LLM provider for tasks based on quotas, estimated usage, and task priorities. - Bootstrap Plan Framework: Developed a system for LLM-generated bootstrap plans, including a dedicated executor (`bootstrap-executor.nix`) for stateful, step-by-step execution. - Autonomous Orchestrator: Created `orchestrator.nix` to act as an "eternal for loop" for picking and running the best next task, leveraging the LLM optimization framework. - Nix Integration: Updated `flake.nix` to expose the orchestrator as an application and added a `run-orchestrator` Makefile target for easy execution. - Documentation: Created CRQ documents for "Emergent LLM Market" and "Bootstrap Plan Optimization," and generated TikTok meme blurbs for key modules to enhance communication and understanding. - File Restructuring: Moved bootstrap-related files to `10/04/bootstrap/` for better organization.
added 30 commits
October 10, 2025 15:14
- Created '10/10/nix2/task.nix' to abstractly define the steps for enforcing the First Principle of Identity. - This file outlines the process of extracting, normalizing, and validating commands, URLs, and submodule information. - It integrates various layers of the 'first-reflection.nix' specification and generates a comprehensive report.
- Created '10/10/nix2/task.d/01-extract-info.nix' to encapsulate the extraction of commands, URLs, and submodule information from flake and .gitmodules files. - This refactors 'task.nix' into smaller, more modular components, aligning with the First Principle of Identity. - Renamed from 'extract-info.nix' to reflect task ordering.
- Created '10/10/nix2/task.d/02-normalize-and-validate.nix' to encapsulate the normalization of extracted information and validation of uniqueness and adherence to rules. - This further refactors 'task.nix' into smaller, more modular components, aligning with the First Principle of Identity.
- Created '10/10/nix2/task.d/03-generate-report.nix' to encapsulate the generation of the comprehensive identity principle enforcement report. - This further refactors 'task.nix' into smaller, more modular components, aligning with the First Principle of Identity.
- Created '10/10/monster-code.nix' to define an abstract specification for assigning unique addresses to Nix flakes (Monster Group) and proving their novelty and relation to neighbors. - This includes abstract functions for canonical representation, addressing, feature extraction, similarity metrics, neighbor identification, and proof generation. - This lays the groundwork for advanced identity principle enforcement.
- Updated '10/10/nix2/task.nix' to import 'monster-code.nix'. - Integrated the calculation of canonical hashes for all flake.nix files, serving as their unique addresses in the Monster Group. - Included flake hashes in the comprehensive report for novelty proof and identification.
- Integrated 'generateQaSample' function into the 'reportingAndRemediation' layer of '10/10/nix2/lib/first-reflection.nix'. - This function formats intermediate validation results into a structured sample suitable for LLM consumption, enabling 6-sigma QA sampling. - This is a key step towards implementing the "mycology lab" concept for quality assurance.
- Created '10/10/prelude.nix' to serve as a central location for defining and managing GitHub repository inputs for Nix flakes. - This file dynamically extracts unique GitHub URLs from flake.nix and .gitmodules files using 'nix-url-extractor.nix'. - It provides a structured way to generate flake inputs from these collected URLs.
- Created '10/10/prelude-bootstrap.nix' as a manual, bootstrapped version of the prelude. - This file explicitly defines and comments each GitHub URL input, providing a clear starting point for dependency management. - The URLs are curated from previous 'grep' output.
- Created '10/10/nix2/repo.nix' as a template for managing individual repositories (main or submodules) within the Nix ecosystem. - This file takes a 'repoPath' and returns an attribute set containing paths to its 'flake.nix' and '.gitmodules' files, if they exist. - This is a foundational step towards implementing a recursive input collection strategy for the First Principle of Identity.
- Modified '10/10/nix-url-extractor.nix' to include a 'parseGithubUrl' function. - This function heuristically extracts owner, repository name, ref, and directory from GitHub URLs. - The module now returns both the raw unique URLs and their parsed components, facilitating more granular analysis and generation of 'repo.nix' files.
- Modified '10/10/nix-url-extractor.nix' to return instructions for generating 'repo.nix' files. - It now includes a 'generateRepoNixContent' function and a 'repoFileInstructions' attribute in its output. - This prepares the module for dynamic generation of 'repo.nix' files in the '10/10/github/' directory.
- Refactored '10/10/prelude.nix' to import and utilize 'nix-url-extractor.nix'. - It now calls the extractor with placeholder flake and gitmodules paths, and returns the parsed URLs for inspection. - This is a step towards dynamic generation of flake inputs based on repository content.
- Created '10/10/bootstrap-context.nix' to manually define submodule information from 'context/pick-up-nix/.gitmodules'. - This represents the first part of converting project context into explicit Nix lookups.
- Created '10/10/bootstrap-context.md' outlining a detailed task plan. - This plan covers completing the manual conversion of '.gitmodules' content into 'bootstrap-context.nix' (in 7 parts). - It also outlines the steps for Rust code extraction, Nix wrapping of Cargo crates, and organizing them in a content-addressable hierarchy.
- Updated '10/10/bootstrap-context.md' with the current status and revised next steps for the manual conversion of '.gitmodules' content into 'bootstrap-context.nix'. - The plan now explicitly outlines moving existing content into part files and processing remaining content in a phased approach.
- Staged modified '10/10/nix2/flake-checker.nix' and '10/10/nix2/qa/test-prelude.nix' with recent changes. - Staged the 'context/' directory containing '.gitmodules' files for future processing. - This commit prepares the repository for the next phase of recursive repository management and advanced QA checks.
…Organized submodule information from .gitmodules into 7 separate Nix files and combined them into a main bootstrap-context.nix.
…n\nEnhanced nix-url-extractor.nix to provide repoFileInstructions, created generate-repos.nix to create repo.nix files, and updated prelude.nix to dynamically import these generated files.
…n\nEnhanced nix-url-extractor.nix to provide repoFileInstructions, created generate-repos.nix to create repo.nix files, and updated prelude.nix to dynamically import these generated files.
…n\nEnhanced nix-url-extractor.nix to provide repoFileInstructions, created generate-repos.nix to create repo.nix files, and updated prelude.nix to dynamically import these generated files.
…to identify Rust projects within the mirrored repositories and integrated it into prelude.nix.
… to extract basic crate information from Cargo.toml files and integrated it into prelude.nix.
…ate-wrapper.nix to generate basic Nix derivations for extracted crates and integrated it into prelude.nix.
…basic check in prelude.nix to detect and report duplicate crate names, enforcing the First Principle of Identity for Rust crates.
- Created `10/10/nix2/list-files/flake.nix` to provide `nixpkgs` and a `nixFilesArtifact`. - Implemented `10/10/nix2/get-nix-file-list.nix` to evaluate `mini-prelude.nix`. - Developed `10/10/nix2/mini-prelude.nix` for defining mini-prelude contexts. - Created `10/10/nix2/createContext.nix` for non-recursive context creation. - Added `10/10/nix2/lib/utils.nix` with helper functions for Nix file processing. - Moved `eval-mini-prelude.nix` to `10/10/nix2/examples/` and added a `README.md` for documentation. - Updated `10/10/Makefile` to use the new Nix-based file listing. - Fixed various Nix evaluation errors related to path handling and JSON serialization.
This commit introduces several improvements and fixes related to Nixification and file handling: - Fixed statix errors and warnings: Addressed issues in `wrap_context.nix` and `content.nix` to comply with Nix coding standards. - Refactored flake-checker usage: Corrected the import and usage of `flake-checker.nix` within `10/10/nix2/flake.nix` for proper flake integration. - Updated Makefile for Nix evaluation: Modified `10/10/Makefile` to use `nix eval` for `get-nix-file-list`, ensuring correct evaluation of Nix expressions. - Enabled NAR file export: Implemented `10/10/export-nar.nix` to create a reproducible NAR archive of the generated Nix file list. - Temporary file cleanup: Removed generated `nix-file-list.json`, `nix-file-list.nar`, `commit-message.txt`, and `grep-results`.
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PR Type
Enhancement, Documentation, Bug fix
Description
• Major Makefile standardization: Implemented comprehensive automation script to update 375+ Makefiles across the project, replacing complex custom targets with standardized templates using
nix_eval_module.mk• Enhanced orchestration system: Added comprehensive task generation, monad context system for LLM orchestration, and derivation spokes library supporting multiple platforms (Rust, Lean4, MiniZinc, cloud deployments)
• Secure credential management: Integrated sops-nix for encrypted OAuth credentials, settings, and Google accounts with comprehensive documentation and setup procedures
• Advanced Nix tooling: Created extensive analysis scripts for dependency reporting, file searching, and derivation evaluation with JSON telemetry output
• Composite flake architecture: Implemented modular flake system with prime-numbered feature components (2,3,5,7,11,13,17,19) for scalable functionality composition
• Mathematical modeling: Added vibe matrix generation, emoji encoding for Nix AST structures, and MiniZinc optimization models for LLM task allocation
• Documentation expansion: Comprehensive guides for Gemini integration, architectural principles using "bott" framework, and meta-mycelium system metaphors
• Repository migration: Updated multiple flake inputs from
streamofrandomtotime-2025repository withfeature/lattice-30030-homedirbranchDiagram Walkthrough
File Walkthrough
29 files
update_makefiles.sh
Add comprehensive Makefile update automation scriptscripts/update_makefiles.sh
• Creates a new bash script to update multiple Makefiles across the
project
• Defines a template file path and an extensive array of 375+
Makefile paths to update
• Implements a loop to overwrite each
Makefile with the template content
• Includes error handling with
set-euo pipefailMakefile
Major Makefile enhancement with new targets and functionalityMakefile
• Adds 25 blank lines at the beginning of the file
• Defines
PROJECT_ROOTvariable usingdirnameandrealpathfunctions• Enhances
lint-nixtarget with statix report generation and file splitting•
Adds new targets:
lint-nix-unstaged,test-qa-flakes,build-mycology-workflow-puml,get-tarball-hash,get-file-hash•
Implements SOPS setup and Gemini CLI integration targets
• Adds
extensive test targets for individual
.nixfiles with evaluationlogging
• Includes orchestrator simulation and analysis targets
derivation-spokes.nix
Add comprehensive derivation spokes library for multi-platformdeploymentlib/derivation-spokes.nix
• Creates a comprehensive library for generating various types of
derivation "spokes"
• Implements functions for MiniZinc, Lean4, Rust,
TikTok, cloud deployments, and storage solutions
• Includes
specialized spokes for LLM code, optimization, and bootstrap planning
• Integrates with IPFS publishing and TikTok configuration systems
lib-run-telemetry.nix
Add telemetry execution wrapper function10/08/hackathon/flakes/consolidated-impure-gemini-telemetry-modules/lib-run-telemetry.nix
• Creates a minimal Nix function for running telemetry with mycology
context
• Implements a curried function pattern taking
impureGeminiTelemetryandmycologyContext• Provides a simple wrapper
for telemetry execution
monad-context.nix
Add monad context system for LLM task orchestrationlib/monad-context.nix
• Creates a new monad context constructor with LLM providers and task
processing capabilities
• Implements
callLLMfunction for interactingwith different LLM providers
• Adds
createDerivationFilefunctionsupporting multiple derivation types (Lean4, Rust, MiniZinc, cloud
deployments, etc.)
• Includes
processTaskfunction with MiniZincoptimization for LLM quota management
nix_search.sh
Add comprehensive Nix file search and analysis toolscripts/nix_search.sh
• Creates comprehensive Nix file search script with keyword filtering
• Supports limiting results, listing imports, and generating summary
reports
• Integrates with
nix_file_analyzer.shfor detailed fileanalysis
• Includes URL grouping functionality for consolidated
reporting
task-generator.nix
Add comprehensive task generation system for multi-platformdeploymentslib/task-generator.nix
• Implements comprehensive task generation system for various
derivation types
• Creates tasks for emoji encoding modules, Lean4,
Rust, TikTok content, and cloud deployments
• Adds LLM-specific task
generation for multiple providers (Gemini, Groq, AmazonQ, etc.)
•
Includes bootstrap planning and OEIS solver refinement tasks
nix_file_analyzer.sh
Add comprehensive Nix file analysis and reporting toolscripts/nix_file_analyzer.sh
• Creates detailed Nix file analysis script with multiple report types
• Extracts imports, file paths, URLs, and flake inputs from Nix files
• Supports selective reporting with command-line flags
• Includes
derivation analysis for flake.nix files
vibe-matrix-generator.nix
Add vibe matrix generation system for prime-concept mappingslib/vibe-matrix-generator.nix
• Implements vibe matrix generation for prime numbers and concepts
•
Creates structured mappings between primes (2, 3, 5, 7, 11, 13, 17,
19) and concepts
• Generates concept vibes for Nix language constructs
(list, ifThenElse, int, attrset, etc.)
• Uses vibe constants for
consistent value representation
evaluate_nix.sh
New Nix flake evaluation and derivation analysis scriptscripts/evaluate_nix.sh
• Added a comprehensive Bash script for evaluating Nix flakes and
generating derivation reports
• Implements functions to discover
flake.nix files, extract derivation paths, and run
nix derivation show• Generates structured JSON reports with telemetry data including
execution time and error handling
• Aggregates results across multiple
flakes into a single comprehensive report
flake.nix
Composite flake with 8 integrated feature componentsflakes/composite-2-3-5-7-11-13-17-19-nix-base-home-oauth-telemetry-llm-output-makefile-input-yolo-self-source/flake.nix
• Created composite flake combining 8 different feature components
(primes 2,3,5,7,11,13,17,19)
• Integrates Nix base, home directory
credentials, OAuth, telemetry capture, LLM output, Makefile input,
YOLO approval, and self-source input
• Provides unified interface with
combined library functions and development shell
NixTikTok.Makefile
Educational TikTok-style Makefile for Nix learning09/25/NixTikTok.Makefile
• Added educational Makefile with TikTok-style targets for learning
Nix concepts
• Includes targets for encoding expressions to prime
emojis and generating prompts via Gemini
• Features creative
descriptions with sound effects and visual filters for each learning
target
Makefile.sops-noob
Beginner-friendly sops and GPG setup Makefile10/06/sops-gemini/Makefile.sops-noob
• Created beginner-friendly Makefile for GPG and sops setup
troubleshooting
• Provides targets for listing GPG keys, testing sops
encryption, and running sops scripts
• Includes detailed help messages
and error handling guidance for newcomers
flake.nix
Convert PlantUML workflow to flake with meme mining use casestheory/hackathon-mycology-workflow-puml/flake.nix
• Converted PlantUML diagram definition from simple Nix expression to
full flake structure
• Added Seven Dwarves meme mining use case with
OEIS-guided pattern analysis
• Integrated proper flake inputs and
outputs with nixpkgs and flake-utils dependencies
flake.nix
Composite flake with 7 integrated feature componentsflakes/composite-2-3-5-7-11-13-17-nix-base-home-oauth-telemetry-llm-output-makefile-input-yolo/flake.nix
• Created composite flake combining 7 feature components (primes
2,3,5,7,11,13,17)
• Integrates base functionality with credentials,
telemetry, LLM output, Makefile input, and YOLO approval
• Provides
unified development environment with combined library functions
flake.nix
Composite flake with 6 integrated feature componentsflakes/composite-2-3-5-7-11-13-nix-base-home-oauth-telemetry-llm-output-makefile-input/flake.nix
• Created composite flake combining 6 feature components (primes
2,3,5,7,11,13)
• Integrates Nix base, credentials, telemetry capture,
LLM output, and Makefile input processing
• Provides development shell
with combined functionality from all feature components
oeis-generator.mzn
MiniZinc OEIS solver template with implementation requirementssolvers/oeis-generator.mzn
• Added MiniZinc model template for OEIS sequence generation with
placeholder constraints
• Includes task description for implementing
recurrence relations and convergence criteria
• Documents
prerequisites and expected outcomes for dynamic sequence generation
flake.nix
Parameterized url2file locator script with configurable project root09/flakes/search-results/flake.nix
• Added
pickUpNix2input and parameterizedurl2fileLocatorScriptwithproject root
• Modified script to accept configurable project root
path instead of hardcoded value
• Enhanced flexibility for different
deployment environments
orchestrator.nix
Main orchestrator implementation with task processing logicorchestrator.nix
• Added main orchestration logic for task processing and file
selection
• Implements vial flake selection based on file extensions
and mycology workflow integration
• Provides app interface for running
the orchestrator with fruiting body output
flake.nix
Data sources aggregation flake for Wikipedia and Wikidataflakes/data-sources/flake.nix
• Created data sources aggregation flake for Wikidata and Wikipedia
content
• Implements functions for wrapping Wikipedia articles and
Wikidata NAR files
• References crq-binstore repository for accessing
cached data sources
flake.nix
Enhanced impure telemetry flake with parameterized inputs09/27/7-concepts/6-qa-testing/tests/consolidated-impure-gemini-telemetry/flake.nix
• Updated gemini-cli input reference and added vial, mycologyContext,
and credsSourceDir inputs
• Parameterized credential source directory
and enhanced telemetry script flexibility
• Modified impure derivation
to accept mycologyContext parameter
nix-monster-encoding.nix
Nix AST to emoji encoding system implementation10/07/nix-monster-encoding.nix
• Implemented emoji encoding system for Nix AST structures using
specialized encoders
• Maps different Nix types to emoji
representations with multiplicity-based repetition
• Provides
recursive encoding with example AST demonstration
nix_dependency_report.sh
Nix dependency analysis and reporting scriptscripts/nix_dependency_report.sh
• Added comprehensive script for analyzing Nix file dependencies and
imports
• Generates reports on import statements, file paths, URLs,
and flake input dependencies
• Provides sorted output with usage
counts for dependency analysis
flake.nix
Composite flake with 5 integrated feature componentsflakes/composite-2-3-5-7-11-nix-base-home-oauth-telemetry-llm-output/flake.nix
• Created composite flake combining 5 feature components (primes
2,3,5,7,11)
• Integrates Nix base, home credentials, OAuth, telemetry
capture, and LLM output functionality
• Provides unified development
environment with combined library functions
nix_eval_module.mk
Reusable Makefile module for Nix derivation analysisscripts/nix_eval_module.mk
• Added Makefile module for standardized Nix derivation analysis
across flakes
• Implements function for analyzing flake derivations
and generating JSON reports
• Provides reusable targets for derivation
analysis with error handling
llm-optimizer.mzn
MiniZinc LLM provider optimization model for task allocation10/04/bootstrap/llm-optimizer.mzn
• Added MiniZinc optimization model for LLM provider task allocation
•
Implements constraints for request quotas, token limits, and rate
limiting
• Maximizes task priority while respecting provider capacity
constraints
create_gemini_sops_secrets.sh
Gemini CLI credential encryption script using sopsscripts/create_gemini_sops_secrets.sh
• Added script for encrypting Gemini CLI credentials using sops
•
Reads files from
~/.geminidirectory and encrypts them with GPG key•
Generates corresponding
secrets.nixfile for sops-nix integrationgemini.nix
Gemini LLM integration library with quota and usage trackinglib/llm/gemini.nix
• Added Gemini LLM integration library with API endpoint configuration
• Includes placeholder functions for quota management and usage
tracking
• Provides framework for API calls with proper credential
handling (commented out)
gemini-prompt-derivation.nix
Gemini CLI derivation with sops credential integration10/04/gemini-prompt-flake/gemini-prompt-derivation.nix
• Added derivation for running gemini-cli with sops-encrypted
credentials
• Implements credential decryption and secure handling
during build process
• Provides impure derivation for API calls with
proper credential management
12 files
Gemini_Test_Lattice.md
Add comprehensive Gemini test lattice documentationdocs/qa/Gemini_Test_Lattice.md
• Creates comprehensive documentation for Gemini-related Nix files
•
Categorizes files into sections: Nix-Task Integrations, Gemini
Integration & Telemetry, QA Testing, etc.
• Maps each file to feature
vectors from the project's architectural framework
• Provides detailed
analysis of impurity characteristics and Gemini integration patterns
global_gemini.md
Add global Gemini AI memory and architectural guidelinesglobal_gemini.md
• Documents Gemini AI's added memories and project guidelines
•
Defines architectural principles using the "bott" framework and
Monster Group theory
• Establishes coding standards for Nix flakes,
file naming, and dependency management
• Includes detailed
mathematical and theoretical foundations for the project architecture
SOP_Secure_Credential_Handling_in_Nix_Scripts.md
Add SOP documentation for secure credential handlingdocs/sops/SOP_Secure_Credential_Handling_in_Nix_Scripts.md
• Documents standard operating procedure for secure credential
management using sops-nix
• Covers encryption process, secrets
definition, and integration into Nix derivations
• Includes Makefile
integration examples for development workflows
full-orchestrator-prompt.md
Add orchestrator system documentation and bootstrap configurationfull-orchestrator-prompt.md
• Defines bootstrap state for orchestrator system with initial global
state
• Specifies composite flake structure combining multiple
features (OAuth, telemetry, etc.)
• Documents time lattice concept for
temporal project organization
• Provides instructions for LLM-based
orchestrator simulation
concepts.md
Add NAR Bridge concept documentation with system diagrams10/09/concepts.md
• Documents NAR Bridge concept and Nix environment relationships
•
Includes Mermaid diagram showing NAR file creation and restoration
workflow
• Identifies current challenges with nix-build failures and
binary discrepancies
• Provides C4 UML container diagram for Nix
system architecture
DREAM2NIX_CODE_SUMMARY.md
Add dream2nix codebase analysis and best practices documentationdocs/sops/DREAM2NIX_CODE_SUMMARY.md
• Summarizes dream2nix codebase structure and common patterns
•
Documents flake structure, mkDerivation module, and statix warning
fixes
• Explains best practices for Nix module authoring within
dream2nix
• Covers various statix warnings and their resolutions
CRQ_047_Proofs_as_Smart_Contracts.md
Add proposal for proofs as smart contracts systemdocs/crqs/CRQ_047_Proofs_as_Smart_Contracts.md
• Proposes system for running proofs as smart contracts on sidechain
•
Documents architecture using Lean4 in secure Nix environment
•
Includes MiniZinc planning for proof scheduling optimization
•
Describes decentralized model submission and evaluation system
status.md
Project status update with architectural developments summary10/06/status.md
• Added comprehensive project status update documenting recent
architectural developments
• Details NixOSI Model integration with
bottframework and secure credential management withsops-nix•
Documents expanded data ingestion capabilities and enhanced system
introspection features
• Outlines recurring patterns including
Nix-centric development and meta-introspection focus
emergencybraindump.md
Emergency brain dump for statix fixing task documentationdocs/emergencybraindump.md
• Documents current task of systematically fixing
statixwarningsacross the project
• Lists specific files where
statixfixes have beenapplied with warning types addressed
• Provides progress summary and
next steps for continued code quality improvements
CRQ_042_Sops_Credential_Setup.md
CRQ document for secure sops credential setup processdocs/crqs/CRQ_042_Sops_Credential_Setup.md
• Added comprehensive CRQ document for secure credential setup using
sops-nix• Details step-by-step process for GPG key generation, sops
configuration, and credential encryption
• Includes acceptance
criteria and verification steps for Gemini CLI credential management
CRQ_046_Abstract_Mathematical_Model.md
Abstract mathematical model documentation for system architecturedocs/crqs/CRQ_046_Abstract_Mathematical_Model.md
• Added comprehensive mathematical model documentation for the system
architecture
• Defines core concepts including states, tasks,
operations, and transformation functions
• Documents monadic
structure, LLM role, and OEIS solver self-referential loop
meta-mycelium-architecture.md
Meta-Mycelium architecture documentation with metaphorical framework10/04/docs/memes/meta-mycelium-architecture.md
• Added architectural documentation describing the Meta-Mycelium
metaphor
• Details quasi-fibers as connection threads and LLM latent
space as "Mountain of Plato"
• Describes Seven Dwarves agents and dank
meta memes as system outputs
4 files
Makefile
Simplify Makefile using common evaluation module09/Makefile
• Replaces extensive custom Makefile content with a minimal template
•
Includes
nix_eval_module.mkfor common functionality• Adds basic
develop.logtarget for Nix development shell testing• Removes complex
targets for GitHub operations, NAR creation, and FOAF generation
Makefile
Standardize build system Makefile to common template09/27/7-concepts/1-build-system/Makefile
• Replaces comprehensive QA Makefile with minimal template
• Includes
nix_eval_module.mkfor shared functionality• Adds basic
develop.logtarget
• Removes specific targets for Gemini CLI testing, build fixes,
and vendor operations
Makefile
Simplify Makefile to focus on development workflow09/25/log_analyzer/flakes/log-analysis-pipeline/Makefile
• Simplifies Makefile by removing extensive build targets and
documentation
• Includes external
nix_eval_module.mkfor commonfunctionality
• Focuses on single
develop.logtarget for developmentshell testing
Makefile
Simplify colosseum-mirror Makefile structure10/03/colosseum-mirror/Makefile
• Simplifies Makefile by removing extensive documentation and comments
• Streamlines build, clean, shell, and archive-daily targets
• Focuses
on essential Nix commands without detailed explanations
6 files
oauth_creds.json
Add encrypted OAuth credentials for Gemini CLI10/06/sops-gemini/sops-secrets/oauth_creds.json
• Adds encrypted OAuth credentials file using SOPS encryption
•
Contains access token, refresh token, ID token, and expiry date fields
• Uses AES256_GCM encryption with PGP key for secure credential
storage
settings.json
Add encrypted settings configuration file10/06/sops-gemini/sops-secrets/settings.json
• Adds encrypted settings configuration file using SOPS
• Contains
general preferences, telemetry settings, core tools list, and security
authentication
• All sensitive configuration values are encrypted with
AES256_GCM
flake.nix
Update flake inputs and add orchestrator applicationflake.nix
• Updates nixpkgs input to specific commit hash for stability
• Adds
spore-vial and dataSources inputs for additional functionality
•
Implements secrets module integration with sopsSecretsPath
configuration
• Adds orchestrator app alongside existing default app
flake.nix
Update flake input to use time-2025 repository09/22/flake.nix
• Updates streamofrandom input URL to point to time-2025 repository
•
Changes branch reference to feature/lattice-30030-homedir
• Updates
variable name from streamofrandom to time2025 in outputs
packages-default.nix
Add default package configuration for impure Gemini telemetry10/08/hackathon/flakes/consolidated-impure-gemini-telemetry-modules/packages-default.nix
• Creates simple package definition using impureGeminiTelemetry
function
• Sets default file path and empty mycology context
•
Provides minimal configuration for telemetry module
google_accounts.json
Encrypted Google accounts configuration for sops integration10/06/sops-gemini/sops-secrets/google_accounts.json
• Added encrypted Google accounts configuration file using sops
•
Contains encrypted account data with PGP encryption metadata
•
Includes active and old account references in encrypted format
2 files
Makefile
Simplified theory Makefile using common evaluation moduletheory/Makefile
• Simplified Makefile to use common
nix_eval_module.mkinclude•
Replaced multiple specific targets with generic
develop.logtarget•
Streamlined approach focusing on development shell testing
Makefile
Simplified Makefile using common evaluation module09/27/7-concepts/6-qa-testing/tests/2025-01-27-build-time-gemini-capture/Makefile
• Replaced complex build and test targets with simple
nix_eval_module.mkinclude• Simplified to focus on development shell
testing with
develop.logtarget• Removed specific build, run, clean,
and NAR export functionality
1 files
bug-repro-build-time-gemini-capture.nix
Updated root flake input URL reference09/25/log_analyzer/flakes/log-analysis-pipeline/test-cases/bug-repro-build-time-gemini-capture.nix
• Updated
rootFlakeinput URL fromstreamofrandomtotime-2025repository
• Changed repository reference to maintain consistency with
project structure
101 files