Merge CompatHelper: bump compat for DataFrames to 1.0

Manifest.toml

@@ -2,18 +2,18 @@
 
 [[Adapt]]
 deps = ["LinearAlgebra"]
-git-tree-sha1 = "ffcfa2d345aaee0ef3d8346a073d5dd03c983ebe"
+git-tree-sha1 = "f1b523983a58802c4695851926203b36e28f09db"
 uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e"
-version = "3.2.0"
+version = "3.3.0"
 
 [[ArgTools]]
 uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f"
 
 [[ArrayInterface]]
 deps = ["IfElse", "LinearAlgebra", "Requires", "SparseArrays", "Static"]
-git-tree-sha1 = "ce17bad65d0842b34a15fffc8879a9f68f08a67f"
+git-tree-sha1 = "2fbfa5f372352f92191b63976d070dc7195f47a4"
 uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9"
-version = "3.1.6"
+version = "3.1.7"
 
 [[Artifacts]]
 uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33"
@@ -33,24 +33,6 @@ git-tree-sha1 = "068fda9b756e41e6c75da7b771e6f89fa8a43d15"
 uuid = "6e4b80f9-dd63-53aa-95a3-0cdb28fa8baf"
 version = "0.7.0"
 
-[[Blosc]]
-deps = ["Blosc_jll"]
-git-tree-sha1 = "84cf7d0f8fd46ca6f1b3e0305b4b4a37afe50fd6"
-uuid = "a74b3585-a348-5f62-a45c-50e91977d574"
-version = "0.7.0"
-
-[[Blosc_jll]]
-deps = ["Libdl", "Lz4_jll", "Pkg", "Zlib_jll", "Zstd_jll"]
-git-tree-sha1 = "aa9ef39b54a168c3df1b2911e7797e4feee50fbe"
-uuid = "0b7ba130-8d10-5ba8-a3d6-c5182647fed9"
-version = "1.14.3+1"
-
-[[BufferedStreams]]
-deps = ["Compat", "Test"]
-git-tree-sha1 = "5d55b9486590fdda5905c275bb21ce1f0754020f"
-uuid = "e1450e63-4bb3-523b-b2a4-4ffa8c0fd77d"
-version = "1.0.0"
-
 [[CSV]]
 deps = ["Dates", "Mmap", "Parsers", "PooledArrays", "SentinelArrays", "Tables", "Unicode"]
 git-tree-sha1 = "6d4242ef4cb1539e7ede8e01a47a32365e0a34cd"
@@ -63,23 +45,11 @@ git-tree-sha1 = "f641eb0a4f00c343bbc32346e1217b86f3ce9dad"
 uuid = "49dc2e85-a5d0-5ad3-a950-438e2897f1b9"
 version = "0.5.1"
 
-[[CategoricalArrays]]
-deps = ["DataAPI", "Future", "JSON", "Missings", "Printf", "Statistics", "StructTypes", "Unicode"]
-git-tree-sha1 = "9f6101597998e8d8cc8c99b85e4aca144354403b"
-uuid = "324d7699-5711-5eae-9e2f-1d82baa6b597"
-version = "0.9.4"
-
 [[ChainRulesCore]]
 deps = ["Compat", "LinearAlgebra", "SparseArrays"]
-git-tree-sha1 = "644c24cd6344348f1c645efab24b707088be526a"
+git-tree-sha1 = "42e3c181483fbd2c416087a0a93838803e358358"
 uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
-version = "0.9.34"
-
-[[CodecZlib]]
-deps = ["TranscodingStreams", "Zlib_jll"]
-git-tree-sha1 = "ded953804d019afa9a3f98981d99b33e3db7b6da"
-uuid = "944b1d66-785c-5afd-91f1-9de20f533193"
-version = "0.7.0"
+version = "0.9.38"
 
 [[CommonSubexpressions]]
 deps = ["MacroTools", "Test"]
@@ -89,9 +59,9 @@ version = "0.3.0"
 
 [[Compat]]
 deps = ["Base64", "Dates", "DelimitedFiles", "Distributed", "InteractiveUtils", "LibGit2", "Libdl", "LinearAlgebra", "Markdown", "Mmap", "Pkg", "Printf", "REPL", "Random", "SHA", "Serialization", "SharedArrays", "Sockets", "SparseArrays", "Statistics", "Test", "UUIDs", "Unicode"]
-git-tree-sha1 = "919c7f3151e79ff196add81d7f4e45d91bbf420b"
+git-tree-sha1 = "ac4132ad78082518ec2037ae5770b6e796f7f956"
 uuid = "34da2185-b29b-5c13-b0c7-acf172513d20"
-version = "3.25.0"
+version = "3.27.0"
 
 [[CompilerSupportLibraries_jll]]
 deps = ["Artifacts", "Libdl"]
@@ -108,10 +78,10 @@ uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a"
 version = "1.6.0"
 
 [[DataFrames]]
-deps = ["CategoricalArrays", "Compat", "DataAPI", "Future", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrettyTables", "Printf", "REPL", "Reexport", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"]
-git-tree-sha1 = "d50972453ef464ddcebdf489d11885468b7b83a3"
+deps = ["Compat", "DataAPI", "Future", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrettyTables", "Printf", "REPL", "Reexport", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"]
+git-tree-sha1 = "56ff5833e5b755d2db654479993e949e73606b64"
 uuid = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0"
-version = "0.22.7"
+version = "1.0.0"
 
 [[DataStructures]]
 deps = ["Compat", "InteractiveUtils", "OrderedCollections"]
@@ -150,9 +120,15 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b"
 
 [[Distributions]]
 deps = ["FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns"]
-git-tree-sha1 = "e64debe8cd174cc52d7dd617ebc5492c6f8b698c"
+git-tree-sha1 = "a837fdf80f333415b69684ba8e8ae6ba76de6aaa"
 uuid = "31c24e10-a181-5473-b8eb-7969acd0382f"
-version = "0.24.15"
+version = "0.24.18"
+
+[[DocStringExtensions]]
+deps = ["LibGit2", "Markdown", "Pkg", "Test"]
+git-tree-sha1 = "9d4f64f79012636741cf01133158a54b24924c32"
+uuid = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae"
+version = "0.8.4"
 
 [[Downloads]]
 deps = ["ArgTools", "LibCURL", "NetworkOptions"]
@@ -177,26 +153,20 @@ uuid = "59287772-0a20-5a39-b81b-1366585eb4c0"
 version = "0.4.2"
 
 [[ForwardDiff]]
-deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "NaNMath", "Random", "SpecialFunctions", "StaticArrays"]
-git-tree-sha1 = "c68fb7481b71519d313114dca639b35262ff105f"
+deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "LinearAlgebra", "NaNMath", "Printf", "Random", "SpecialFunctions", "StaticArrays"]
+git-tree-sha1 = "e2af66012e08966366a43251e1fd421522908be6"
 uuid = "f6369f11-7733-5829-9624-2563aa707210"
-version = "0.10.17"
+version = "0.10.18"
 
 [[Future]]
 deps = ["Random"]
 uuid = "9fa8497b-333b-5362-9e8d-4d0656e87820"
 
-[[HDF5]]
-deps = ["Blosc", "Compat", "HDF5_jll", "Libdl", "Mmap", "Random", "Requires"]
-git-tree-sha1 = "8be8b31df938483ba2ab27f38a8bc91a9e43ae92"
-uuid = "f67ccb44-e63f-5c2f-98bd-6dc0ccc4ba2f"
-version = "0.14.3"
-
-[[HDF5_jll]]
-deps = ["Artifacts", "JLLWrappers", "LibCURL_jll", "Libdl", "OpenSSL_jll", "Pkg", "Zlib_jll"]
-git-tree-sha1 = "fd83fa0bde42e01952757f01149dd968c06c4dba"
-uuid = "0234f1f7-429e-5d53-9886-15a909be8d59"
-version = "1.12.0+1"
+[[GZip]]
+deps = ["Libdl"]
+git-tree-sha1 = "039be665faf0b8ae36e089cd694233f5dee3f7d6"
+uuid = "92fee26a-97fe-5a0c-ad85-20a5f3185b63"
+version = "0.5.1"
 
 [[IfElse]]
 git-tree-sha1 = "28e837ff3e7a6c3cdb252ce49fb412c8eb3caeef"
@@ -209,9 +179,9 @@ uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240"
 
 [[Interpolations]]
 deps = ["AxisAlgorithms", "LinearAlgebra", "OffsetArrays", "Random", "Ratios", "SharedArrays", "SparseArrays", "StaticArrays", "WoodburyMatrices"]
-git-tree-sha1 = "eb1dd6d5b2275faaaa18533e0fc5f9171cec25fa"
+git-tree-sha1 = "1e0e51692a3a77f1eeb51bf741bdd0439ed210e7"
 uuid = "a98d9a8b-a2ab-59e6-89dd-64a1c18fca59"
-version = "0.13.1"
+version = "0.13.2"
 
 [[InvertedIndices]]
 deps = ["Test"]
@@ -225,9 +195,10 @@ uuid = "82899510-4779-5014-852e-03e436cf321d"
 version = "1.0.0"
 
 [[JLLWrappers]]
-git-tree-sha1 = "a431f5f2ca3f4feef3bd7a5e94b8b8d4f2f647a0"
+deps = ["Preferences"]
+git-tree-sha1 = "642a199af8b68253517b80bd3bfd17eb4e84df6e"
 uuid = "692b3bcd-3c85-4b1f-b108-f13ce0eb3210"
-version = "1.2.0"
+version = "1.3.0"
 
 [[JSON]]
 deps = ["Dates", "Mmap", "Parsers", "Unicode"]
@@ -276,21 +247,15 @@ version = "7.1.1"
 deps = ["Libdl"]
 uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
 
+[[LogExpFunctions]]
+deps = ["DocStringExtensions"]
+git-tree-sha1 = "49c5c32deda5999d15378b64ee10f2e87831ab25"
+uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688"
+version = "0.2.2"
+
 [[Logging]]
 uuid = "56ddb016-857b-54e1-b83d-db4d58db5568"
 
-[[Lz4_jll]]
-deps = ["Libdl", "Pkg"]
-git-tree-sha1 = "51b1db0732bbdcfabb60e36095cc3ed9c0016932"
-uuid = "5ced341a-0733-55b8-9ab6-a4889d929147"
-version = "1.9.2+2"
-
-[[MAT]]
-deps = ["BufferedStreams", "CodecZlib", "HDF5", "SparseArrays"]
-git-tree-sha1 = "61f049fe2f7168b8002d5794a1bb37f1f3bc92e4"
-uuid = "23992714-dd62-5051-b70f-ba57cb901cac"
-version = "0.9.2"
-
 [[MLStyle]]
 git-tree-sha1 = "a667f58636b36ba10145d46a4afe70492850af8c"
 uuid = "d8e11817-5142-5d16-987a-aa16d5891078"
@@ -307,10 +272,10 @@ deps = ["Base64"]
 uuid = "d6f4376e-aef5-505a-96c1-9c027394607a"
 
 [[MatrixDepot]]
-deps = ["CodecZlib", "DataFrames", "LinearAlgebra", "MAT", "Markdown", "Mmap", "Serialization", "SparseArrays"]
-git-tree-sha1 = "7c04076450669743e2ed73938a1065685d52aba0"
+deps = ["GZip", "LinearAlgebra", "Markdown", "Mmap", "Serialization", "SparseArrays", "SuiteSparse", "Test"]
+git-tree-sha1 = "a500c3f98b2273c44ca6ad2332d4b3423ce49c7f"
 uuid = "b51810bb-c9f3-55da-ae3c-350fc1fbce05"
-version = "1.0.3"
+version = "0.8.0"
 
 [[MbedTLS_jll]]
 deps = ["Artifacts", "Libdl"]
@@ -354,12 +319,6 @@ git-tree-sha1 = "b3dfef5f2be7d7eb0e782ba9146a5271ee426e90"
 uuid = "6fe1bfb0-de20-5000-8ca7-80f57d26f881"
 version = "1.6.2"
 
-[[OpenSSL_jll]]
-deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
-git-tree-sha1 = "71bbbc616a1d710879f5a1021bcba65ffba6ce58"
-uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95"
-version = "1.1.1+6"
-
 [[OpenSpecFun_jll]]
 deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"]
 git-tree-sha1 = "9db77584158d0ab52307f8c04f8e7c08ca76b5b3"
@@ -411,11 +370,17 @@ git-tree-sha1 = "17275485f373e6673f7e7f97051f703ed5b15b20"
 uuid = "85a6dd25-e78a-55b7-8502-1745935b8125"
 version = "0.2.4"
 
+[[Preferences]]
+deps = ["TOML"]
+git-tree-sha1 = "ea79e4c9077208cd3bc5d29631a26bc0cff78902"
+uuid = "21216c6a-2e73-6563-6e65-726566657250"
+version = "1.2.1"
+
 [[PrettyTables]]
 deps = ["Crayons", "Formatting", "Markdown", "Reexport", "Tables"]
-git-tree-sha1 = "574a6b3ea95f04e8757c0280bb9c29f1a5e35138"
+git-tree-sha1 = "a7162ad93a899333717481f448a235ffafeb5eba"
 uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d"
-version = "0.11.1"
+version = "1.0.0"
 
 [[Printf]]
 deps = ["Unicode"]
@@ -512,31 +477,25 @@ version = "0.2.4"
 
 [[StaticArrays]]
 deps = ["LinearAlgebra", "Random", "Statistics"]
-git-tree-sha1 = "2f01a51c23eed210ff4a1be102c4cc8236b66e5b"
+git-tree-sha1 = "e8cd1b100d37f5b4cfd2c83f45becf61c762eaf7"
 uuid = "90137ffa-7385-5640-81b9-e52037218182"
-version = "1.1.0"
+version = "1.1.1"
 
 [[Statistics]]
 deps = ["LinearAlgebra", "SparseArrays"]
 uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
 
 [[StatsBase]]
 deps = ["DataAPI", "DataStructures", "LinearAlgebra", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics"]
-git-tree-sha1 = "a83fa3021ac4c5a918582ec4721bc0cf70b495a9"
+git-tree-sha1 = "4bc58880426274277a066de306ef19ecc22a6863"
 uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91"
-version = "0.33.4"
+version = "0.33.5"
 
 [[StatsFuns]]
-deps = ["Rmath", "SpecialFunctions"]
-git-tree-sha1 = "ced55fd4bae008a8ea12508314e725df61f0ba45"
+deps = ["LogExpFunctions", "Rmath", "SpecialFunctions"]
+git-tree-sha1 = "30cd8c360c54081f806b1ee14d2eecbef3c04c49"
 uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c"
-version = "0.9.7"
-
-[[StructTypes]]
-deps = ["Dates", "UUIDs"]
-git-tree-sha1 = "89b390141d2fb2ef3ac2dc32e336f7a5c4810751"
-uuid = "856f2bd8-1eba-4b0a-8007-ebc267875bd4"
-version = "1.5.0"
+version = "0.9.8"
 
 [[SuiteSparse]]
 deps = ["Libdl", "LinearAlgebra", "Serialization", "SparseArrays"]
@@ -548,15 +507,15 @@ uuid = "fa267f1f-6049-4f14-aa54-33bafae1ed76"
 
 [[TableTraits]]
 deps = ["IteratorInterfaceExtensions"]
-git-tree-sha1 = "b1ad568ba658d8cbb3b892ed5380a6f3e781a81e"
+git-tree-sha1 = "c06b2f539df1c6efa794486abfb6ed2022561a39"
 uuid = "3783bdb8-4a98-5b6b-af9a-565f29a5fe9c"
-version = "1.0.0"
+version = "1.0.1"
 
 [[Tables]]
 deps = ["DataAPI", "DataValueInterfaces", "IteratorInterfaceExtensions", "LinearAlgebra", "TableTraits", "Test"]
-git-tree-sha1 = "a9ff3dfec713c6677af435d6a6d65f9744feef67"
+git-tree-sha1 = "c9d2d262e9a327be1f35844df25fe4561d258dc9"
 uuid = "bd369af6-aec1-5ad0-b16a-f7cc5008161c"
-version = "1.4.1"
+version = "1.4.2"
 
 [[Tar]]
 deps = ["ArgTools", "SHA"]
@@ -566,12 +525,6 @@ uuid = "a4e569a6-e804-4fa4-b0f3-eef7a1d5b13e"
 deps = ["InteractiveUtils", "Logging", "Random", "Serialization"]
 uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
 
-[[TranscodingStreams]]
-deps = ["Random", "Test"]
-git-tree-sha1 = "7c53c35547de1c5b9d46a4797cf6d8253807108c"
-uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa"
-version = "0.9.5"
-
 [[UUIDs]]
 deps = ["Random", "SHA"]
 uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4"
@@ -599,12 +552,6 @@ version = "0.5.3"
 deps = ["Libdl"]
 uuid = "83775a58-1f1d-513f-b197-d71354ab007a"
 
-[[Zstd_jll]]
-deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
-git-tree-sha1 = "2c1332c54931e83f8f94d310fa447fd743e8d600"
-uuid = "3161d3a3-bdf6-5164-811a-617609db77b4"
-version = "1.4.8+0"
-
 [[nghttp2_jll]]
 deps = ["Artifacts", "Libdl"]
 uuid = "8e850ede-7688-5339-a07c-302acd2aaf8d"

NEWS.md

@@ -12,6 +12,9 @@ MobilityAnalyzers.jl NEWS
 - Version 1.0.0 is the last one to support Julia 0.6.4
 
 ---
+# v2.5.3
+Merge CompatHelper: bump compat for "DataFrames" to "1.0"
+
 # v2.5.2
 Merge CompatHelper: bump compat for "BenchmarkTools" to "0.7"
 Tested for potential Julia 1.6 regressions (none found)

Project.toml

@@ -1,7 +1,7 @@
 name = "DifferentialMobilityAnalyzers"
 uuid = "050a7be8-18f9-52d6-bdba-0a194485d082"
 authors = ["Markus Petters <[email protected]>"]
-version = "2.5.2"
+version = "2.5.3"
 
 [deps]
 BenchmarkTools = "6e4b80f9-dd63-53aa-95a3-0cdb28fa8baf"