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README
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.
|-- 1data
| |-- anti-cancer-comps
| | |-- Anti-cancer-peptides-read-fasta.rmd
| | `-- anti_cancer_comps.csv
| |-- cancer_human_comps.csv
| `-- human-comps
| |-- human-control-comps.rmd
| |-- human_ctrl_comps.csv
| `-- uniprot-taxonomy%3A%22Homo+sapiens+%28Human%29+%5B9606%5D%22+existence%3A%22Evid--.fasta
|-- LICENSE
|-- ORIGINAL-DATA
| |-- anti_cancer_comps.csv
| |-- cancer_human_comps.csv
| |-- human_ctrl_comps.csv
| |-- uniprot-anti+cancer+peptide.fasta.gz
| `-- uniprot-taxonomy%3A%22Homo+sapiens+%28Human%29+%5B9606%5D%22+existence%3A%22Evid--.fasta.gz
|-- README
|-- README.2
|-- anti-cancer-human-modeling.Rproj
|-- boruta-dim-redux-GOOD
| |-- Boruta-notes.rmd
| |-- boruta-dim-redux-1.html
| |-- boruta-dim-redux-1.rmd
| |-- boruta-dim-redux-2-50-runs.rmd
| |-- boruta-dim-redux-2.html
| |-- boruta-dim-redux-3-500-runs.html
| |-- boruta-dim-redux-3-500-runs.rmd
| `-- boruta-dim-redux-4-500-runs.rmd
|-- corrplot-GOOD
| |-- corrplot-1.html
| |-- corrplot-1.rmd
| |-- corrplot-2-w-post-boruta.html
| `-- corrplot-2-w-post-boruta.rmd
|-- eda-GOOD
| |-- class_table.Rdata
| `-- eda.1.rmd
|-- factominer-NO-GOOD
| |-- Investigate.Rmd
| |-- Workspace.RData
| |-- code.R
| `-- factominer-1.rmd
|-- misc-info
| |-- KEEP_mono_di_peptide_analysis.Rmd
| |-- dipeptide_analysis.Rmd
| |-- mono_di_peptide_analysis-II.Rmd
| `-- na_test.rmd
|-- near-zero-variance-GOOD
| |-- near-zero-variance-1.html
| `-- near-zero-variance-1.rmd
|-- pca-dim-redux
| |-- pca-dim-redux-139-features-9-2-19.rmd
| |-- pca-dim-redux-139-wAC-features-9-2-19.rmd
| |-- pca-dim-redux-142-features-9-2-19.rmd
| |-- pca-dim-redux-20aa-BEST.html
| |-- pca-dim-redux-20aa-BEST.rmd
| |-- pca-dim-redux-20aa-beta.rmd
| |-- pca-dim-redux-20aa.rmd
| |-- pca-dim-redux-friday1.rmd
| `-- pca-dim-redux.rmd
|-- realtive-imp-NO-GOOD
| `-- rela-imp-dim-redux-1.rmd
|-- reject-corr-predictors-GOOD
| |-- identifying-correlated-predictors-1.html
| `-- identifying-correlated-predictors-1.rmd
`-- rfe
`-- rfe-1.rmd
14 directories, 52 files