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  1. twas_sim twas_sim Public

    Using real genotype data, simulate a complex trait as a function of latent expression, fit eQTL weights in independent data, and perform GWAS/TWAS on complex trait.

    Shell 26 4

  2. susiepca susiepca Public

    Scalable Ultra-Sparse Bayesian PCA

    Python 23 5

  3. ma-focus ma-focus Public

    MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets

    Python 20 4

  4. sushie sushie Public

    Software to perform multi-ancestry SNP fine-mapping on molecular data

    Python 14 2

  5. FactorGo FactorGo Public

    Software to infer latent pleiotropic components from GWAS summary data

    Python 10

  6. traceax traceax Public

    Stochastic trace estimation using JAX

    Python 10 2

Repositories

Showing 10 of 14 repositories
  • traceax Public

    Stochastic trace estimation using JAX

    mancusolab/traceax’s past year of commit activity
    Python 10 Apache-2.0 2 3 0 Updated Jun 26, 2024
  • ma-focus Public

    MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets

    mancusolab/ma-focus’s past year of commit activity
    Python 20 GPL-3.0 4 8 0 Updated Apr 26, 2024
  • sushie Public

    Software to perform multi-ancestry SNP fine-mapping on molecular data

    mancusolab/sushie’s past year of commit activity
    Python 14 MIT 2 1 0 Updated Apr 24, 2024
  • FactorGo Public

    Software to infer latent pleiotropic components from GWAS summary data

    mancusolab/FactorGo’s past year of commit activity
    Python 10 MIT 0 0 0 Updated Apr 24, 2024
  • sushie-project-codes Public

    The analysis codes for sushie project

    mancusolab/sushie-project-codes’s past year of commit activity
    R 0 0 0 0 Updated Apr 17, 2024
  • geneax Public
    mancusolab/geneax’s past year of commit activity
    Python 0 Apache-2.0 0 3 0 Updated Feb 21, 2024
  • susiepca Public

    Scalable Ultra-Sparse Bayesian PCA

    mancusolab/susiepca’s past year of commit activity
    Python 23 MIT 5 4 0 Updated Feb 13, 2024
  • mancusolab/gdf15_analyses’s past year of commit activity
    R 0 0 0 0 Updated Sep 14, 2023
  • twas_sim Public

    Using real genotype data, simulate a complex trait as a function of latent expression, fit eQTL weights in independent data, and perform GWAS/TWAS on complex trait.

    mancusolab/twas_sim’s past year of commit activity
    Shell 26 4 1 0 Updated Jun 18, 2023
  • FactorGo_analysis Public

    Analysis code for FactorGo project

    mancusolab/FactorGo_analysis’s past year of commit activity
    R 1 0 0 0 Updated Mar 24, 2023

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