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MSIght is a program produced by the Lingjun Li Lab at the University of Wisconsin-Madison for automated integration of H&E, MSI, and LC-MS/MS datasets

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MSIght

MSIght is a program produced by the Lingjun Li Lab at the University of Wisconsin-Madison for automated integration of H&E, MSI, and LC-MS/MS datasets

Getting started

Installation

You can install MSIght directly from PyPI:

pip install msight

How to Cite

Fields, L.; Miles, H. N.; Adrian, A. E.; Patrenets, E.; Ricke, W. A.; Li, L. (2025). MSIght: A Modular Platform for Improved Confidence in Global, Untargeted Mass Spectrometry Imaging Annotation. J. Proteome Res. https://doi.org/10.1021/acs.jproteome.4c01140

Major release notes

Version 0.0.1 (Released 9/17/2024)
  • Initial release

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MSIght is a program produced by the Lingjun Li Lab at the University of Wisconsin-Madison for automated integration of H&E, MSI, and LC-MS/MS datasets

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  • Jupyter Notebook 92.8%
  • Python 6.6%
  • HCL 0.6%