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fix bib entries with abstracts
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@leipzig
leipzig authored Jun 28, 2021
2 parents 1596dba + b96ab65 commit 1c23889
Showing 1 changed file with 36 additions and 22 deletions.
58 changes: 36 additions & 22 deletions data/citations/metadata-in-rcr-refs.bib
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Expand Up @@ -563,7 +563,8 @@ @UNPUBLISHED{Obels2019-sy
year = 2019,
url = "psyarxiv.com/fk8vh",
keywords = "data; open data; Psychology; reproducibility; RR",
doi = "10.31234/osf.io/fk8vh"
doi = "10.31234/osf.io/fk8vh",
note = {PsyArXiv Preprint}
}

@ARTICLE{Ciccarese2013-lm,
Expand Down Expand Up @@ -632,6 +633,7 @@ @gmail.com.

@ARTICLE{noauthor_2020-zo,
title = "Welcome to a new {ERA} of reproducible publishing",
author = {Emmy Tsang and Giuliano Maciocci},
abstract = "New open-source technology lets eLife authors publish Executable
Research Articles that treat live code and data as first-class
citizens.",
Expand Down Expand Up @@ -914,6 +916,7 @@ @MISC{Angelino2010-cs

@INCOLLECTION{Richardson2016-fu,
title = "Geospatial Semantic Web",
author = {Krzysztof Janowicz and Pascal Hitzler},
booktitle = "International Encyclopedia of Geography: People, the Earth,
Environment and Technology",
editor = "Richardson, Douglas and Castree, Noel and Goodchild, Michael F
Expand Down Expand Up @@ -1152,7 +1155,7 @@ @ARTICLE{Moreau_undated-lo
author = "Moreau, Luc and Ding, Li and Futrelle, Joe and Garijo, D and
Groth, Paul and Jewell, Mike and Miles, Simon and Missier, Paolo
and Pan, Jeff and Zhao, Jun",
journal = "URL http://openprovenance. org/model/opmo. (Cited on page 139. )"
journal = "URL http://openprovenance.org/model/opmo. (Cited on page 139. )"
}

@ARTICLE{Janowicz2014-wz,
Expand Down Expand Up @@ -1222,6 +1225,7 @@ @ARTICLE{Tierney2020-ue
year = 2020,
url = "http://arxiv.org/abs/2002.11626",
archivePrefix = "arXiv",
journal = "arXiv",
eprint = "2002.11626",
primaryClass = "cs.DL",
arxivid = "2002.11626"
Expand Down Expand Up @@ -2534,6 +2538,7 @@ @ARTICLE{Emsley2018-yd
@ARTICLE{noauthor_undated-dp,
title = "Journal Article Tag Suite 1.0: National Information Standards
Organization standard of journal extensible markup language",
author = {Sun Huh},
abstract = "In the era of information technology, scholarly journals cannot
escape the rising tide of technological advancement. To be
exposed more easily to readers, the web forms of scholarly
Expand Down Expand Up @@ -2562,7 +2567,8 @@ @ARTICLE{noauthor_undated-dp
url = "http://escienceediting.org/journal/view.php?number=21",
language = "en",
issn = "0036-8326",
doi = "10.6087/kcse.2014.1.99"
doi = "10.6087/kcse.2014.1.99",
year = {2014}
}

@ARTICLE{The_Gene_Ontology_Consortium2019-pt,
Expand Down Expand Up @@ -2636,6 +2642,7 @@ @ARTICLE{Pineau2020-bs
year = 2020,
url = "http://arxiv.org/abs/2003.12206",
archivePrefix = "arXiv",
journal = "arXiv",
eprint = "2003.12206",
primaryClass = "cs.LG",
arxivid = "2003.12206"
Expand Down Expand Up @@ -3075,19 +3082,16 @@ @ARTICLE{Berthold2009-uw

% The entry below contains non-ASCII chars that could not be converted
% to a LaTeX equivalent.
@ARTICLE{Oberkampf2018-kn,
@techreport{Oberkampf2018-kn,
title = "20 Allotrope Data {Format--Semantic} Data Management in Life
Sciences. pdf",
author = "Oberkampf, Heiner and Krieg, Helge and Senger, Christian and
Weber, Thomas and Colsman, Wolfgang",
abstract = "… visualization. We present the Allotrope Data Format, the
Allotrope Foundation Ontologies, ZONTAL Space and OSee as a
comprehensive set of tools for laboratory data management … tion
1 Allotrope Foundation and Allotrope Data Format …",
publisher = "Semantic Web Applications and Tools for Healthcare and Life
Sciences",
abstract = "Research intensive industries like the (bio-) pharmaceutical industry require a data architecture enabling universal laboratory data storage comprising describing metadata, ontologies and vocabularies, long-term data persistence, and metadata structure visualization. We present the Allotrope Data Format, the Allotrope Foundation Ontologies, ZONTAL Spaceand OSee as a comprehensive set of tools for laboratory data management.",
publisher = "Semantic Web Applications and Tools for Healthcare and Life Sciences",
year = 2018,
url = "https://swat4hcls.figshare.com/articles/20_Allotrope_Data_Format_Semantic_Data_Management_in_Life_Sciences_pdf/7346489/files/13574621.pdf"
url = "https://swat4hcls.figshare.com/articles/20_Allotrope_Data_Format_Semantic_Data_Management_in_Life_Sciences_pdf/7346489/files/13574621.pdf",
institution = {{OSTHUS}}
}

@ARTICLE{Arabas2014-dq,
Expand Down Expand Up @@ -3127,6 +3131,7 @@ @ARTICLE{Arabas2014-dq
year = 2014,
url = "http://arxiv.org/abs/1408.2123",
archivePrefix = "arXiv",
journal = "arXiv",
eprint = "1408.2123",
primaryClass = "cs.CE",
arxivid = "1408.2123"
Expand Down Expand Up @@ -3216,6 +3221,7 @@ @ARTICLE{Publio2018-ib
year = 2018,
url = "http://arxiv.org/abs/1807.05351",
archivePrefix = "arXiv",
journal = "arXiv",
eprint = "1807.05351",
primaryClass = "cs.LG",
arxivid = "1807.05351"
Expand All @@ -3228,13 +3234,14 @@ @ARTICLE{Cao_undated-bz
V{\i}ctor and Jones, Matthew B and Lud{\"a}scher, Bertram and
McPhillips, Timothy and Missier, Paolo and Schwalm, Christopher
and Slaughter, Peter and Vieglais, Dave and {Others}",
abstract = "Abstract. The DataONE federated data network has adopted and
abstract = "The DataONE federated data network has adopted and
extended the PROV model to support the collection, storage,
indexing, and user browsing of the provenance of data packages
stored in its member nodes. The PROV extension, ProvONE, adds
provenance",
journal = "homepages.cs.ncl.ac.uk",
url = "http://homepages.cs.ncl.ac.uk/paolo.missier/doc/dataone-prov-3-years-later.pdf"
url = "http://homepages.cs.ncl.ac.uk/paolo.missier/doc/dataone-prov-3-years-later.pdf",
year = {2016}
}

@ARTICLE{Stodden2013-ce,
Expand Down Expand Up @@ -4195,6 +4202,7 @@ @ARTICLE{Barba2018-qv
year = 2018,
url = "http://arxiv.org/abs/1802.03311",
archivePrefix = "arXiv",
journal = "arXiv",
eprint = "1802.03311",
primaryClass = "cs.DL",
arxivid = "1802.03311"
Expand Down Expand Up @@ -4484,6 +4492,7 @@ @graphpad.com.

@ARTICLE{noauthor_2021-it,
title = "Announcing the next phase of Executable Research Articles",
autor = {Giulia Guizzardi and Nokome Bentley and Giuliano Maciocci},
abstract = "eLife and Stencila renew their partnership to make Executable
Research Articles accessible to even more researchers and
publishers.",
Expand Down Expand Up @@ -4545,20 +4554,20 @@ @ARTICLE{Sefton1_undated-xr
files, BioCompute Objects for regulatory science [9], CodeMeta
for software …",
journal = "conference.eresearch.edu.au",
url = "https://conference.eresearch.edu.au/wp-content/uploads/2019/08/2019-eResearch_103_-Introducing-RO-Crate-research-object-data-packaging.pdf"
url = "https://conference.eresearch.edu.au/wp-content/uploads/2019/08/2019-eResearch_103_-Introducing-RO-Crate-research-object-data-packaging.pdf",
year = {2019}
}

% The entry below contains non-ASCII chars that could not be converted
% to a LaTeX equivalent.
@MISC{noauthor_2020-ah,
@unpublished{noauthor_2020-ah,
title = "{ISO/TC} 276 - Biotechnology",
booktitle = "{ISO}",
abstract = "Standardization in the field of biotechnology processes that
includes the following topics: Terms and definitions;
biobanks and bioresources; analytical methods; bioprocessing;
data processing including annotation, analysis, validation,
comparability and integration; metrology. ISO/TC 276
Biotechnology …",
comparability and integration; metrology. ISO/TC 276 Biotechnology will work closely with related committes in order to identify standardization needs and gaps, and collaborate with other organisations to avoid duplications and overlapping standardization activities. The committee will not pursue subjects within the scope of other TCs including but not limited to ISO/TC 212 and ISO/TC 34/SC 16.",
year = 2020,
url = "https://www.iso.org/committee/4514241.html",
howpublished = "\url{https://www.iso.org/committee/4514241.html}",
Expand Down Expand Up @@ -5054,7 +5063,7 @@ @ARTICLE{Valenzuela-Escarcega2018-ue
keywords = "charlie\_rcr.bib"
}

@ARTICLE{Hoyle2016-lt,
@techreport{Hoyle2016-lt,
title = "{DDI} as a Common Format for Export and Import for Statistical
Packages",
author = "Hoyle, Larry and Wackerow, Joachim",
Expand All @@ -5081,6 +5090,7 @@ @ARTICLE{Hoyle2016-lt
publisher = "IASSIST Quarterly",
year = 2016,
url = "https://kuscholarworks.ku.edu/handle/1808/19900",
institution = {KU Scholar Works},
keywords = "DDI, data formats, metadata, statistical packages,
Stat/Transfer, JMP, R, SAS, SPSS, Stata; Supplementary materials"
}
Expand Down Expand Up @@ -5494,6 +5504,7 @@ @ARTICLE{Ali2020-fw
year = 2020,
url = "http://arxiv.org/abs/2001.10560",
archivePrefix = "arXiv",
journal = "arXiv",
eprint = "2001.10560",
primaryClass = "cs.LG",
arxivid = "2001.10560"
Expand Down Expand Up @@ -5593,7 +5604,7 @@ @ARTICLE{Love2014-se
pmc = "PMC4302049"
}

@UNPUBLISHED{Kulmanov2020-mv,
@article{Kulmanov2020-mv,
title = "Machine learning with biomedical ontologies",
author = "Kulmanov, Maxat and Smaili, Fatima Zohra and Gao, Xin and
Hoehndorf, Robert",
Expand Down Expand Up @@ -6043,7 +6054,7 @@ @gmail.com.
doi = "10.1038/s41592-021-01169-5"
}

@ARTICLE{Allaire2016-vl,
@misc{Allaire2016-vl,
title = "Rticles: Article Formats for {R} Markdown",
author = "Allaire, J J and Wickham, H and Xie, Y and Vaidyanathan, R and
{Others}",
Expand Down Expand Up @@ -6248,7 +6259,7 @@ @ARTICLE{Duck2014-vk
pmc = "PMC4147923"
}

@ARTICLE{Jones2016-ta,
@techreport{Jones2016-ta,
title = "{CodeMeta}: an exchange schema for software metadata. {KNB} Data
Repository",
author = "Jones, Matthew B and Boettiger, Carl and Mayes, Abby Cabunoc and
Expand All @@ -6258,6 +6269,7 @@ @ARTICLE{Jones2016-ta
Ashley and Hong, Neil Chue and Cruse, Patricia and Katz, Dan and
Goble, Carole",
publisher = "KNB Data Repository",
institution = "KNB Data Repository",
year = 2016,
url = "http://dx.doi.org/10.5063/schema/codemeta-1.0",
doi = "10.5063/schema/codemeta-1.0"
Expand All @@ -6279,7 +6291,7 @@ @ARTICLE{Boettiger2015-om
doi = "10.1145/2723872.2723882"
}

@UNPUBLISHED{Halioui2016-rr,
@article{Halioui2016-rr,
title = "Towards an ontology-based recommender system for relevant
bioinformatics workflows",
author = "Halioui, Ahmed and Valtchev, Petko and Diallo, Abdoulaye Banire",
Expand Down Expand Up @@ -6676,6 +6688,7 @@ @ARTICLE{McPhillips2015-hu
year = 2015,
url = "http://arxiv.org/abs/1502.02403",
archivePrefix = "arXiv",
journal = "arXiv",
eprint = "1502.02403",
primaryClass = "cs.SE",
arxivid = "1502.02403"
Expand Down Expand Up @@ -6850,6 +6863,7 @@ @ARTICLE{Wattanakriengkrai2020-ou
year = 2020,
url = "http://arxiv.org/abs/2004.00199",
archivePrefix = "arXiv",
journal = "arXiv",
eprint = "2004.00199",
primaryClass = "cs.SE",
arxivid = "2004.00199"
Expand Down

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