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Update 2023-11-29-Subcommunities-paper.md
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lasy committed Nov 29, 2023
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permalink: /posts/2023/11/Subcommunities-paper
tags:
- research
- vaginal microbiota
- women's health
- topic models
---

In this [paper](http://lasy.github.io/publication/2023-Symul-VMRC-subcommunities), we show that mixed membership models - here, topic models (LDA) - better describe vaginal microbiota composition than "community (state) types" that are based on clustering approaches.
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![figure2](/images/publications/2023_Symul_fig2.png)


[Download pdf](http://lasy.github.io/files/papers/2023_Symul_subcommunities.pdf)
[Download the pdf here](http://lasy.github.io/files/papers/2023_Symul_subcommunities.pdf)

I warmly thanks all my co-authors, the VMRC for their relentless efforts in understanding the vaginal microbiota and how to restore it to a healthy state, and the study participants who accepted a quite intensive collection of swabs.

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