Workdir now set to work by default
#350
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was causing a number of issues because it was using /tmp and also a new folder for each run.. This makes it a subfolder of the output folder like it used to be, though we don't archive it up by default..
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Was causing a number of issues because it was using /tmp and also a new folder for each run..
This makes it a subfolder of the output folder like it used to be, though we don't archive it up by default..
I'll merge this in without much review so things don't stay broken, but we can revisit how temporary files are dealt with in a later PR..