disable unsupported atlases, and update tests accordingly

khanlab · Jan 8, 2025 · c6427d9 · c6427d9
1 parent 4bc891b
commit c6427d9
Show file tree

Hide file tree

Showing 2 changed files with 0 additions and 15 deletions.
diff --git a/.github/workflows/python-testing.yml b/.github/workflows/python-testing.yml
@@ -118,14 +118,4 @@ jobs:
         run: |
           poetry run hippunfold test_data/bids_singleT2w test_out participant -np --modality T1w --generate-myelin-map
 
-      - name: Test modality T1w with magdeburg atlas
-        run: |
-          poetry run hippunfold test_data/bids_T1w test_out participant -np --modality T1w --atlas magdeburg
-
-      - name: Test modality T1w with freesurfer atlas
-        run: |
-          poetry run hippunfold test_data/bids_T1w test_out participant -np --modality T1w --atlas freesurfer
 
-      - name: Test modality T1w with bigbrain and freesurfer atlas
-        run: |
-          poetry run hippunfold test_data/bids_T1w test_out participant -np --modality T1w --atlas bigbrain freesurfer
diff --git a/hippunfold/config/snakebids.yml b/hippunfold/config/snakebids.yml
@@ -173,12 +173,7 @@ parse_args:
 
   --atlas:
     choices:
-      - 'bigbrain'
-      - 'magdeburg'
-      - 'freesurfer'
       - 'multihist7'
-      - 'macaque'
-      - 'mouse'
       - 'bbhist'
     default: 'multihist7'
     help: 'Select the atlas (unfolded space) to use for subfield labels. (default: %(default)s)'