fix dag issue

also reverts naming of unfoldeven to unfold (we now call the upstream surface unfolduneven)
khanlab · Mar 3, 2025 · 76eb984 · 76eb984
1 parent 53382ba
commit 76eb984
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Showing 2 changed files with 11 additions and 11 deletions.
diff --git a/hippunfold/workflow/rules/native_surf.smk b/hippunfold/workflow/rules/native_surf.smk
@@ -123,8 +123,8 @@ rule update_native_mesh_structure:
         surf_gii=bids(
             root=work,
             datatype="surf",
-            suffix="{surfname}.surf.gii",
-            space="{space}",
+            suffix="{surfname,midthickness|inner|outer}.surf.gii",
+            space="{space,corobl|unfold}",
             hemi="{hemi}",
             label="{label}",
             **inputs.subj_wildcards,
@@ -448,7 +448,7 @@ rule warp_native_mesh_to_unfold:
             datatype="surf",
             suffix="{surfname}.surf.gii",
             desc="nostruct",
-            space="unfold",
+            space="unfolduneven",
             hemi="{hemi}",
             label="{label}",
             **inputs.subj_wildcards,
@@ -476,7 +476,7 @@ rule space_unfold_vertices_evenly:
             datatype="surf",
             suffix="midthickness.surf.gii",
             desc="nostruct",
-            space="unfold",
+            space="unfolduneven",
             hemi="{hemi}",
             label="{label}",
             **inputs.subj_wildcards,
@@ -499,7 +499,7 @@ rule space_unfold_vertices_evenly:
             datatype="surf",
             suffix="midthickness.surf.gii",
             desc="nostruct",
-            space="unfoldeven",
+            space="unfold",
             hemi="{hemi}",
             label="{label}",
             **inputs.subj_wildcards,
@@ -530,7 +530,7 @@ rule gen_inner_outer_unfoldeven:
             datatype="surf",
             suffix="midthickness.surf.gii",
             desc="nostruct",
-            space="unfoldeven",
+            space="unfold",
             hemi="{hemi}",
             label="{label}",
             **inputs.subj_wildcards,
@@ -543,7 +543,7 @@ rule gen_inner_outer_unfoldeven:
             datatype="surf",
             suffix="{surfname,inner|outer}.surf.gii",
             desc="nostruct",
-            space="unfoldeven",
+            space="unfold",
             hemi="{hemi}",
             label="{label}",
             **inputs.subj_wildcards,

diff --git a/hippunfold/workflow/rules/unfold_reg.smk b/hippunfold/workflow/rules/unfold_reg.smk
@@ -96,7 +96,7 @@ rule native_metric_to_unfold_nii:
             root=root,
             datatype="surf",
             suffix="inner.surf.gii",
-            space="unfoldeven",
+            space="unfold",
             hemi="{hemi}",
             label="{label}",
             **inputs.subj_wildcards,
@@ -105,7 +105,7 @@ rule native_metric_to_unfold_nii:
             root=root,
             datatype="surf",
             suffix="midthickness.surf.gii",
-            space="unfoldeven",
+            space="unfold",
             hemi="{hemi}",
             label="{label}",
             **inputs.subj_wildcards,
@@ -114,7 +114,7 @@ rule native_metric_to_unfold_nii:
             root=root,
             datatype="surf",
             suffix="outer.surf.gii",
-            space="unfoldeven",
+            space="unfold",
             hemi="{hemi}",
             label="{label}",
             **inputs.subj_wildcards,
@@ -136,7 +136,7 @@ rule native_metric_to_unfold_nii:
             root=work,
             datatype="anat",
             suffix="{metric}.nii.gz",
-            space="unfoldeven",
+            space="unfold",
             hemi="{hemi}",
             label="{label}",
             **inputs.subj_wildcards,