GitHub - kerimoff/coverage_plot: This repo contains a nextflow pipeline to generate the coverage plots for QTL interpretation

kerimoff / coverage_plot Public

This repo contains a nextflow pipeline to generate the coverage plots for QTL interpretation

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Name		Name	Last commit message	Last commit date
Latest commit History 38 Commits
bin		bin
conf		conf
data		data
modules		modules
workflows		workflows
.gitignore		.gitignore
Dockerfile		Dockerfile
copy_bigwigs.sh		copy_bigwigs.sh
input_test_Alasoo_2018_all_quants.tsv		input_test_Alasoo_2018_all_quants.tsv
main.nf		main.nf
make_cov_plots.sh		make_cov_plots.sh
make_plot_from_data.sh		make_plot_from_data.sh
nextflow.config		nextflow.config
plot_from_data.nf		plot_from_data.nf
submit_Alasoo_full_test.sh		submit_Alasoo_full_test.sh
submit_plot_Alasoo_complete_test.sh		submit_plot_Alasoo_complete_test.sh
submit_plot_Alasoo_exon_test.sh		submit_plot_Alasoo_exon_test.sh
submit_plot_Alasoo_ge_test.sh		submit_plot_Alasoo_ge_test.sh
submit_plot_Alasoo_leafcutter_test.sh		submit_plot_Alasoo_leafcutter_test.sh
submit_plot_Alasoo_tx_test.sh		submit_plot_Alasoo_tx_test.sh
submit_plot_Alasoo_txrev_test.sh		submit_plot_Alasoo_txrev_test.sh
submit_plot_from_data.sh		submit_plot_from_data.sh