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  1. welch-lab/liger welch-lab/liger Public

    R package for integrating and analyzing multiple single-cell datasets

    R 396 78

  2. welch-lab/MultiVelo welch-lab/MultiVelo Public

    Multi-omic velocity inference

    Python 107 11

  3. welch-lab/VeloVAE welch-lab/VeloVAE Public

    Deep Generative Modeling of RNA Velocity

    Jupyter Notebook 35 6

  4. welch-lab/pyliger welch-lab/pyliger Public

    Python package for integrating and analyzing multiple single-cell datasets (A Python version of LIGER)

    Jupyter Notebook 28 5

  5. welch-lab/PerturbNet welch-lab/PerturbNet Public

    PerturbNet is a deep generative model that can predict the distribution of cell states induced by chemical or genetic perturbation

    Jupyter Notebook 28 10