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Merge pull request #10 from jump-cellpainting/snc-typo-fixes
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Fix typos
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shntnu authored Nov 1, 2022
2 parents 411f5cf + fb154a7 commit 5026d83
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### What’s coming up

- Extending the metadata and notebooks to the three pilots and the reprocessed dataset so that all these datasets can be quickly loaded together.
- Curated annotations for the compounds, obtained from [ChemBL](https://www.ebi.ac.uk/chembl/) and other sources.
- Curated annotations for the compounds, obtained from [ChEMBL](https://www.ebi.ac.uk/chembl/) and other sources.
- The remaining data [components](https://github.com/broadinstitute/cellpainting-gallery/blob/main/folder_structure.md) (normalized profiles, feature selected profiles, treatment-level consensus profiles, quality control results) and the remaining sources for the principal dataset.
- Deep learning [embeddings](https://tfhub.dev/google/imagenet/efficientnet_v2_imagenet1k_s/feature_vector/2) using a pre-trained neural network for all 5 datasets.
- [Quality control](https://github.com/broadinstitute/cellpainting-gallery/blob/main/folder_structure.md#quality_control-folder-structure) results at the image level for the principal dataset to allow removing bad images.
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To cite individual JUMP Cell Painting datasets, please follow the guidelines in the Cell Painting Gallery citation [guide](https://github.com/broadinstitute/cellpainting-gallery/#citationlicense).
Examples are as follows:

_We used the dataset cpg001 (Cimini et al., 2022), available from the Cell Painting Gallery on the Registry of Open Data on AWS (https://registry.opendata.aws/cellpainting-gallery/)._
_We used the dataset cpg0001 (Cimini et al., 2022), available from the Cell Painting Gallery on the Registry of Open Data on AWS (https://registry.opendata.aws/cellpainting-gallery/)._

_We used the dataset cpg000 (Chandrasekaran et al., 2022a), available from the Cell Painting Gallery on the Registry of Open Data on AWS (https://registry.opendata.aws/cellpainting-gallery/)._
_We used the dataset cpg0000 (Chandrasekaran et al., 2022a), available from the Cell Painting Gallery on the Registry of Open Data on AWS (https://registry.opendata.aws/cellpainting-gallery/)._

## Gratitude

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