deBruijn-dna-assembly

This tools allows to align DNA short sequences by creating deBrujin graph.

Usage

Download the repo:

git clone https://github.com/juanesarango/deBruijn-dna-assembly
cd deBruijn-dna-assembly

To compile the tool into a binary:

g++ -o ./bin/deBrujinDNA main.cpp

To run the example:

./bin/deBrujinDNA

Understanding deBruijn Graph for DNA Assembly:

Name		Name	Last commit message	Last commit date
Latest commit History 9 Commits
analyses		analyses
bin		bin
data		data
.DS_Store		.DS_Store
.gitignore		.gitignore
README.md		README.md
config.h		config.h
debruijn.cpp		debruijn.cpp
debruijn.h		debruijn.h
genome.h		genome.h
main.cpp		main.cpp