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20 Open 884 Closed
20 Open 884 Closed
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Issues list

Error "kegg.funcover is empty"
#957 opened Mar 31, 2025 by weishwu
11
Problems connecting to the host and downloading databases
#955 opened Mar 26, 2025 by pedrosepre
1
sqm_longreads.pl not finishing
#954 opened Mar 24, 2025 by ogrecio
1
SQM tables
#953 opened Mar 24, 2025 by ctmlab4
3
Coassembly stopped and died at step 17
#952 opened Mar 19, 2025 by inej90
1
Error in analysis
#947 opened Mar 7, 2025 by VedPatel362
10
How to combine outputs of sqm_longreads.pl without reprocessing FASTQ files
#918 opened Jan 6, 2025 by bojusemo
6
sqm_mapper: reuse mapped reference genome possible?
#905 opened Nov 15, 2024 by dutchscientist
8
Metadata connections SQMtools enhancement New feature or request
#849 opened Jun 7, 2024 by inej90
1
Workflow, tool version outline enhancement New feature or request
#825 opened Apr 11, 2024 by s-junguy
7
The "tax" parameter of the "subsetTax" function could accept list of taxons enhancement New feature or request SQMtools
#749 opened Nov 9, 2023 by glenjasper
3
Add the taxonomic category "Kingdom" for eukaryotes enhancement New feature or request Taxonomic annotation
#747 opened Nov 8, 2023 by glenjasper
4
Using dedupe.sh to identify and remove contigs contained in others (merged mode) Assembly enhancement New feature or request merged mode seqmerge mode
#701 opened Jun 26, 2023 by eperezv
2
sqm_longreads yields wrong mcount table bug Something isn't working sqm_longreads SQM_reads
#686 opened May 19, 2023 by jllavin77
10
option parser issue enhancement New feature or request
#609 opened Jan 18, 2023 by moritzbuck
1
sqm_reads.pl fails if -p is set to an absolute path instead of a relative one bug Something isn't working sqm_longreads SQM_reads
#586 opened Nov 22, 2022 by fpusan
04.rundiamond.pl error while using sqm_annot.pl
#558 opened Oct 10, 2022 by PuspenduSardar
8
Support for EggNOG version 5.0.2 databases enhancement New feature or request
#506 opened Jun 20, 2022 by mdehollander
2
sqm_reads2tables.py problem enhancement New feature or request
#477 opened May 4, 2022 by fpeti11
13
sqm2tables.py - All fixes in one place :-) SQMtools
#416 opened Jan 20, 2022 by biobrad
8
ProTip! Adding no:label will show everything without a label.