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jlaehne committed Mar 30, 2024
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2 changes: 1 addition & 1 deletion doc/changes.rst
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.. This is a stub, see the top level CHANGELOG.rst file for the changelog.
.. This is a stub, see the top level CHANGES.rst file for the changelog.
.. include:: ../CHANGES.rst
16 changes: 0 additions & 16 deletions doc/citing.rst

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1 change: 1 addition & 0 deletions doc/conf.py
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# numpydoc is necessary to parse the docstring using sphinx
# otherwise the nitpicky option will raise many warnings
# "numpydoc",
"sphinx_design",
"sphinx_favicon",
"sphinx.ext.autodoc",
"sphinx.ext.githubpages",
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24 changes: 3 additions & 21 deletions doc/index.rst
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Welcome to HoloSpy's documentation!
***********************************
**HoloSpy** is a Python package extending the functionality for multi-dimensional
data analysis provided by the `HyperSpy <https://hyperspy.org/>`_ library. It is
aimed at helping with the analysis of (off-axis) electron holography data.

Check out the :ref:`installation` section for further information, including
how to start using this project.

.. note::

This is an open-source community project: everyone is welcome to contribute.
Please read our (see :ref:`contributing_label`) guidelines and get started!

Contents
========

.. toctree::
:maxdepth: 2
:maxdepth: 1
:hidden:

user_guide/index.rst
api/index.rst
contributing.rst
changes.rst


.. include:: citing.rst

.. include:: license.rst
.. include:: intro.rst

119 changes: 119 additions & 0 deletions doc/intro.rst
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Welcome to HoloSpy's documentation!
***********************************

**HoloSpy** is a Python package extending the functionality for
multi-dimensional data analysis provided by the `HyperSpy
<https://hyperspy.org/>`_ library. It is aimed at helping with the analysis of
(off-axis) electron holography data. Originally developed as part of `HyperSpy
<https://hyperspy.org/>`_, these and other domain specific features have been
split out into dedicated packages with the :external+hyperspy:ref:`HyperSpy 2.0
release <changes_2.0>`.

Check out the :ref:`installation` section for further information, including
how to start using this project.

.. note::

This is an open-source community project: everyone is welcome to contribute.
Please read our (see :ref:`contributing_label`) guidelines and get started!


Learning resources
==================

.. grid:: 2 3 3 3
:gutter: 2

.. grid-item-card::
:link: user_guide/installation
:link-type: doc

:octicon:`rocket;2em;sd-text-info` Getting Started
^^^

New to holoSpy or the HyperSpy ecosystem? The getting started guide provides an
introduction on basic usage of holoSpy and how to install it.

.. grid-item-card::
:link: user_guide/index
:link-type: doc

:octicon:`book;2em;sd-text-info` User Guide
^^^

The user guide provides in-depth information on key concepts of holoSpy
and how to use it along with background information and explanations.

.. grid-item-card::
:link: api/index
:link-type: doc

:octicon:`code-square;2em;sd-text-info` Reference
^^^

Documentation of the metadata specification and of the Application Progamming Interface (API),
which describe how holoSpy functions work and which parameters can be used.

.. grid-item-card::
:link: https://github.com/hyperspy/holospy-demos

:octicon:`workflow;2em;sd-text-info` Tutorials
^^^

Tutorials in form of Jupyter Notebooks to learn how to process
off-axis electron holography data using holoSpy.

.. grid-item-card::
:link: contributing
:link-type: doc

:octicon:`people;2em;sd-text-info` Contributing
^^^

holoSpy and the whole HyperSpy ecosystem are a community project
maintained for and by its users. There are many ways you can help!

.. grid-item-card::
:link: changes
:link-type: doc

:octicon:`zap;2em;sd-text-info` Changes
^^^

To learn about recent changes, check out the release notes.


Citing HoloSpy
==============

HoloSpy is maintained by the `HyperSpy community
<https://github.com/hyperspy/holospy/contributors>`_.

If HoloSpy has been significant to a project that leads to an academic
publication, please acknowledge that fact by citing it. The DOI in the
badge below is the `Concept DOI <https://help.zenodo.org/faq/#versioning>`_ --
it can be used to cite the project without referring to a specific
version. If you are citing HoloSpy because you have used it to process data,
please use the DOI of the specific version that you have employed. You can
find it by clicking on the DOI badge below:

.. image:: https://zenodo.org/badge/doi/10.5281/zenodo.10137993.svg
:class: sd-bg-transparent
:alt: doi: 10.5281/zenodo.10137993
:target: https://doi.org/10.5281/zenodo.10137993


License
=======

HoloSpy is free software: you can redistribute it and/or modify
it under the terms of the `GNU General Public License (GPL)
<https://www.gnu.org/licenses/#GPL>`_ as published by
the Free Software Foundation, either version 3 of the license, or
(at your option) any later version.

HoloSpy is distributed in the hope that it will be useful,
but **without any warranty**; without even the implied warranty of
**merchantability** or **fitness for a particular purpose**. See the
`GNU General Public License <https://www.gnu.org/licenses/#GPL>`_
for more details.
14 changes: 0 additions & 14 deletions doc/license.rst

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