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27 Open 16 Closed
27 Open 16 Closed
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Issues list

Annotate with SpliceVarDB
#44 opened Oct 22, 2024 by tonydisera
@tonydisera
1
Problem with gene search typeahead
#43 opened Sep 23, 2024 by tonydisera
@tonydisera
1
Multiple tracks for different tissues and related samples
#42 opened May 23, 2024 by tonydisera
Add tooltips over transcripts
#41 opened May 23, 2024 by tonydisera
Display transcripts in zoom panel (toggle to show/hide)
#40 opened May 23, 2024 by tonydisera
Add control splice junction file for background stats on events
#39 opened May 23, 2024 by tonydisera
For donor and acceptor sequence, bold/highlight acceptor sequence
#38 opened May 23, 2024 by tonydisera
Filter variants
#37 opened May 23, 2024 by tonydisera
Object details needs to find a new home
#36 opened Apr 12, 2024 by tonydisera
How to characterize splice junction where donor and acceptor within an exon (on the MANE SELECT transcript)
#35 opened Apr 12, 2024 by tonydisera
The transcripts menu has padding on right and extends beyond width on main panel
#33 opened Apr 11, 2024 by tonydisera 1.0.3
When all transcripts shown, label for BRCA1 appears to the left instead of the right of the transcript
#32 opened Apr 11, 2024 by tonydisera
IGV.js memory bloat - each time IGV is shown, memory increased by ~ 300 MB
#31 opened Apr 4, 2024 by tonydisera 1.0.3
When app launched from Mosaic, check for file conflicts when launching apps (e.g. multiple bam files exist) when experiment_id not provided
#28 opened Apr 1, 2024 by tonydisera 1.0.6
When multiple genes added, expansion layout obscures that there are more genes
#27 opened Mar 31, 2024 by tonydisera 1.0.3
Use d3 force layout to for pileup of variants
#25 opened Mar 30, 2024 by tonydisera
Copy/paste gene names
#22 opened Mar 30, 2024 by tonydisera 1.0.6
Demo file for rnasplice.iobio
#20 opened Mar 30, 2024 by tonydisera
Allow user to select splice junctions after clicking on an exon
#19 opened Mar 30, 2024 by tonydisera
Pan outside gene region, select coordinates outside gene region
#18 opened Mar 30, 2024 by tonydisera
Add button to unselect splice junction
#17 opened Mar 30, 2024 by tonydisera
Implement sliding window to find splice junction overlaps (see TUBA1A for recent project)
#16 opened Mar 30, 2024 by tonydisera
Gene panel - show phenotypes and diseases (like gene.iobio)
#14 opened Mar 30, 2024 by tonydisera
IGV button on Zoom panel, Donor & Acceptor panels
#13 opened Mar 30, 2024 by tonydisera 1.0.3
Variant tooltip - copy variant coordinates, zoom to region
#12 opened Mar 30, 2024 by tonydisera 1.0.6
ProTip! Exclude everything labeled bug with -label:bug.