Missing allele freq and clinvar annotations for variant on MT genes

[tonydisera]

It looks like gnomAD doesn't have allele frequencies for variants in mitochondrial genes. Look into annotating from Allele Freq Aggregator ALPHA.

[tonydisera]

From Ralph R.

...it looks like the gnomAD data is missing, it's not a rare variant (12% of the population in gnomAD) but is shown with gnom AD 0.00 values and no link although the data is available here:
https://gnomad.broadinstitute.org/variant/M-13708-G-A?dataset=gnomad_r4

mitochondrial data is just not available on gnomAD for older versions, but gnomAD 4.1 lists it.

there's also a ClinVar entry for it that doesn't show up in gene iobio:
https://www.ncbi.nlm.nih.gov/clinvar/variation/9696/