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Oh2 112 add property patient code to laboratory for print dto #62

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e469147
update works
ArnaudFofou May 30, 2022
727382b
Upgrade to spring boot 2.6.7
Jun 2, 2022
6f4fee7
improvment: Update docker environment configuration
Jun 6, 2022
03ad1f0
refactor: Update Readme file
Jun 6, 2022
d2257df
Fix login api
Jun 9, 2022
ff41729
Update newAdmissions end poind
Jun 9, 2022
258a68a
change post and put methode to return and objet
ArnaudFofou Jun 10, 2022
f4af638
fix bug about therapie
ArnaudFofou Jun 13, 2022
e09fbe5
update patientMapper
ArnaudFofou Jun 13, 2022
1006981
update getcurrentAdmission
ArnaudFofou Jun 13, 2022
54a7293
OH2-93 Fix bug about therapie
ArnaudFofou Jun 13, 2022
496ba9a
Fix-on-backend
ArnaudFofou Jun 14, 2022
d68b684
fix bug about test
ArnaudFofou Jun 14, 2022
d29235b
update Test
ArnaudFofou Jun 14, 2022
37d74a7
fix bug about update Lab
ArnaudFofou Jun 14, 2022
2f95917
update api
ArnaudFofou Jun 14, 2022
bc6b4d1
update AdmissionController to fix discharge Date in getPatientAdmissions
ArnaudFofou Jun 15, 2022
e7d4b44
update OpdController to fix date
ArnaudFofou Jun 15, 2022
7341197
fix bug about opd
ArnaudFofou Jun 15, 2022
c6af243
update opdController
ArnaudFofou Jun 15, 2022
3771068
last works
ArnaudFofou Jun 23, 2022
55d4655
OH2-102 Adjust getOpdByDates params
ArnaudFofou Jun 23, 2022
6c8a1f1
update AdmissionController
ArnaudFofou Jun 25, 2022
0357c8a
OH2-103 Add patient-related properties to OpdDTO
ArnaudFofou Jun 27, 2022
413f9be
Add_patient's name to laboratories/exams payload
ArnaudFofou Jun 30, 2022
7958189
Add Test for Laboratory
ArnaudFofou Jul 1, 2022
73ad729
update Lab
ArnaudFofou Jul 4, 2022
143f052
OH-111 Implement getExamById
ArnaudFofou Jul 4, 2022
810f376
OH2-112 Add property patientCode to LaboratoryForPrintDTO
ArnaudFofou Jul 7, 2022
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12 changes: 12 additions & 0 deletions .env
Original file line number Diff line number Diff line change
@@ -0,0 +1,12 @@
MYSQL_TAG=8.0.25
MYSQL_DATABASE=oh
MYSQL_PORT=3306
MYSQL_ROOT_PASSWORD=root
MYSQL_USER=isf
MYSQL_PASSWORD=isf123

GITHUB_ORG=SteveGT96
OH_CORE_BRANCH=staging3
OH_API_BRANCH=staging3-upgrade-2.6.7
API_VERSION=0.0.1
API_PORT:8080
22 changes: 22 additions & 0 deletions Dockerfile.backend
Original file line number Diff line number Diff line change
@@ -0,0 +1,22 @@
FROM maven:3.8-jdk-8

ARG GITHUB_ORG
ARG OH_CORE_BRANCH
ARG OH_API_BRANCH
ARG OH_VERSION

RUN mkdir /oh_web
RUN apt-get update
RUN apt-get install -y git
WORKDIR /oh_web
RUN git clone https://github.com/${GITHUB_ORG}/openhospital-core.git --depth=1 -b ${OH_CORE_BRANCH}
WORKDIR ./openhospital-core
RUN mvn clean install -DskipTests=true
WORKDIR /oh_web
RUN git clone https://github.com/${GITHUB_ORG}/openhospital-api.git --depth=1 -b ${OH_API_BRANCH}
WORKDIR ./openhospital-api
# Database connection must be changed in order to work in docker network
RUN sed -i 's/localhost/database/g' src/main/resources/database.properties
RUN mvn clean install -DskipTests=true

CMD mvn spring-boot:run
18 changes: 18 additions & 0 deletions Dockerfile.database
Original file line number Diff line number Diff line change
@@ -0,0 +1,18 @@
FROM mysql:5.7.9

ARG GITHUB_ORG
ARG OH_CORE_BRANCH

ENV MYSQL_DATABASE=oh
ENV MYSQL_ROOT_PASSWORD=root
ENV MYSQL_USER=isf
ENV MYSQL_PASSWORD=isf123

RUN mkdir /oh_web
RUN apt-get update
RUN apt-get install -y git
WORKDIR /oh_web
RUN git clone https://github.com/${GITHUB_ORG}/openhospital-core.git --depth=1 -b ${OH_CORE_BRANCH}
WORKDIR ./openhospital-core

EXPOSE 3306
15 changes: 15 additions & 0 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -38,6 +38,21 @@ For the moment, to build this project you should

Service available on localhost:8080

## How to deploy backend in docker environment

Make sure you have docker with docker-compose installed, then run the following commands:

- DOCKER_BUILDKIT=0 docker-compose build [--no-cache]
- docker-compose up
- docker-compose exec database /bin/bash
- cd sql/
- mysql -u isf -p
- source create_all_demo.sql;

When done successfully, head over at http://localhost:[API_PORT]/oh-api/swagger-ui.html

You can change the deployment branch and the repository organization in the .env file.

## How to contribute

You can find the contribution guidelines in the [Open Hospital wiki][contribution-guide].
Expand Down
40 changes: 40 additions & 0 deletions docker-compose.yml
Original file line number Diff line number Diff line change
@@ -0,0 +1,40 @@
version: '3.8'
services:
database:
container_name: database
restart: always
command: --lower_case_table_names=1
environment:
- "MYSQL_ROOT_PASSWORD=${MYSQL_ROOT_PASSWORD}"
- "MYSQL_PASSWORD=${MYSQL_PASSWORD}"
- "MYSQL_USER=${MYSQL_USER}"
- "MYSQL_DATABASE=${MYSQL_DATABASE}"
build:
context: .
dockerfile: Dockerfile.database
args:
OH_CORE_BRANCH: ${OH_CORE_BRANCH}
GITHUB_ORG: ${GITHUB_ORG}
ports:
- "${MYSQL_PORT}:3306"
backend:
container_name: backend
build:
context: .
dockerfile: Dockerfile.backend
args:
API_VERSION: ${API_VERSION}
OH_CORE_BRANCH: ${OH_CORE_BRANCH}
OH_API_BRANCH: ${OH_API_BRANCH}
GITHUB_ORG: ${GITHUB_ORG}
restart: always
ports:
- "${API_PORT}:8080"
depends_on:
- database
logging:
driver: "json-file"
options:
max-size: "100m"
max-file: "10"

33 changes: 30 additions & 3 deletions pom.xml
Original file line number Diff line number Diff line change
Expand Up @@ -5,7 +5,7 @@
<parent>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-parent</artifactId>
<version>1.5.22.RELEASE</version>
<version>2.6.7</version>
<relativePath/> <!-- lookup parent from repository -->
</parent>
<groupId>org.isf</groupId>
Expand All @@ -16,6 +16,7 @@

<properties>
<oh.version>2.0.0</oh.version>
<oh-core.version>1.12.0-SNAPSHOT</oh-core.version>
<java.version>1.8</java.version>
<spring-boot-admin.version>2.1.3</spring-boot-admin.version>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
Expand All @@ -37,6 +38,11 @@
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>commons-logging</groupId>
<artifactId>commons-logging</artifactId>
<version>1.1.1</version>
</dependency>
<!-- <dependency>
<groupId>org.slf4j</groupId>
<artifactId>slf4j-api</artifactId>
Expand Down Expand Up @@ -73,10 +79,21 @@
<artifactId>spring-boot-starter-test</artifactId>
<scope>test</scope>
</dependency>
<dependency>
<groupId>junit</groupId>
<artifactId>junit</artifactId>
<version>4.12</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.hibernate</groupId>
<artifactId>hibernate-validator</artifactId>
<version>7.0.4.Final</version>
</dependency>
<dependency>
<groupId>org.isf</groupId>
<artifactId>OH-core</artifactId>
<version>${oh.version}</version>
<version>${oh-core.version}</version>
<exclusions>
<exclusion>
<groupId>org.hibernate.javax.persistence</groupId>
Expand All @@ -91,7 +108,7 @@
<dependency>
<groupId>org.isf</groupId>
<artifactId>OH-core</artifactId>
<version>${oh.version}</version>
<version>${oh-core.version}</version>
<classifier>tests</classifier>
<type>test-jar</type>
<scope>test</scope>
Expand Down Expand Up @@ -143,6 +160,16 @@
<artifactId>java-jwt</artifactId>
<version>3.18.2</version>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-test</artifactId>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-test</artifactId>
<scope>test</scope>
</dependency>
</dependencies>

<build>
Expand Down
63 changes: 39 additions & 24 deletions src/main/java/org/isf/accounting/rest/BillController.java
Original file line number Diff line number Diff line change
Expand Up @@ -21,6 +21,8 @@
*/
package org.isf.accounting.rest;

import java.time.LocalDateTime;
import java.time.ZoneId;
import java.util.ArrayList;
import java.util.Date;
import java.util.GregorianCalendar;
Expand Down Expand Up @@ -209,25 +211,30 @@ public ResponseEntity<List<BillDTO>> searchBills(@RequestParam(value = "datefrom
@RequestParam(value = "dateto") @DateTimeFormat(pattern = "yyyy-MM-dd'T'HH:mm:ss.SSS'Z'") Date dateTo,
@RequestParam(value = "patient_code", required = false, defaultValue = "") Integer code) throws OHServiceException {

GregorianCalendar datefrom = new GregorianCalendar();
datefrom.setTime(dateFrom);

GregorianCalendar dateto = new GregorianCalendar();
dateto.setTime(dateTo);

LocalDateTime dateF = null;
if(dateFrom != null) {
dateF = dateFrom.toInstant().atZone(ZoneId.systemDefault()).toLocalDateTime();
}

LocalDateTime dateT = null;
if(dateTo != null) {
dateT = dateTo.toInstant().atZone(ZoneId.systemDefault()).toLocalDateTime();
}

List<Bill> bills;

List<BillDTO> billDTOS;

if (code == null) {
LOGGER.info("Get payments datefrom: {} dateTo: {}", datefrom, dateto);
bills = billManager.getBills(datefrom, dateto);
LOGGER.info("Get payments datefrom: {} dateTo: {}", dateF, dateT);
bills = billManager.getBills(dateF, dateT);
} else {
Patient pat = patientManager.getPatientById(code);

LOGGER.info("Get Bills datefrom: {} dateTo: {} patient: {}", datefrom, dateto, pat);
LOGGER.info("Get Bills datefrom: {} dateTo: {} patient: {}", dateF, dateT, pat);

bills = billManager.getBills(datefrom, dateto, pat);
bills = billManager.getBills(dateF, dateT, pat);
}

billDTOS = billMapper.map2DTOList(bills);
Expand Down Expand Up @@ -257,19 +264,23 @@ public ResponseEntity<List<BillPaymentsDTO>> searchBillsPayments(

List<BillPaymentsDTO> paymentsDTOS;

GregorianCalendar datefrom = new GregorianCalendar();
datefrom.setTime(dateFrom);

GregorianCalendar dateto = new GregorianCalendar();
dateto.setTime(dateTo);
LocalDateTime dateF = null;
if(dateFrom != null) {
dateF = dateFrom.toInstant().atZone(ZoneId.systemDefault()).toLocalDateTime();
}

LocalDateTime dateT = null;
if(dateTo != null) {
dateT = dateTo.toInstant().atZone(ZoneId.systemDefault()).toLocalDateTime();
}

LOGGER.info("Get getPayments datefrom: {} dateTo: {}", datefrom, dateto);
LOGGER.info("Get getPayments datefrom: {} dateTo: {}", dateF, dateT);

if (code == null) {
payments = billManager.getPayments(datefrom, dateto);
payments = billManager.getPayments(dateF, dateT);
} else {
Patient pat = patientManager.getPatientById(code);
payments = billManager.getPayments(datefrom, dateto, pat);
payments = billManager.getPayments(dateF, dateT, pat);
}

paymentsDTOS = billPaymentsMapper.map2DTOList(payments);
Expand Down Expand Up @@ -401,17 +412,21 @@ public ResponseEntity<List<BillDTO>> searchBills(@RequestParam(value="datefrom")
@RequestParam(value="dateto")@DateTimeFormat(pattern = "yyyy-MM-dd'T'HH:mm:ss.SSS'Z'") Date dateTo,
@RequestBody BillItemsDTO billItemDTO) throws OHServiceException {

GregorianCalendar datefrom = new GregorianCalendar();
datefrom.setTime(dateFrom);

GregorianCalendar dateto = new GregorianCalendar();
dateto.setTime(dateTo);
LocalDateTime dateF = null;
if(dateFrom != null) {
dateF = dateFrom.toInstant().atZone(ZoneId.systemDefault()).toLocalDateTime();
}

LocalDateTime dateT = null;
if(dateTo != null) {
dateT = dateTo.toInstant().atZone(ZoneId.systemDefault()).toLocalDateTime();
}

BillItems billItem = billItemsMapper.map2Model(billItemDTO);

LOGGER.info("Get Bills datefrom: {} dateTo: {} Bill ITEM ID: {}", datefrom, dateto, billItem.getId());
LOGGER.info("Get Bills datefrom: {} dateTo: {} Bill ITEM ID: {}", dateF, dateT, billItem.getId());

List<Bill> bills = billManager.getBills(datefrom, dateto, billItem);
List<Bill> bills = billManager.getBills(dateF, dateT, billItem);

List<BillDTO> billDTOS = billMapper.map2DTOList(bills);

Expand Down
1 change: 0 additions & 1 deletion src/main/java/org/isf/admission/dto/AdmissionDTO.java
Original file line number Diff line number Diff line change
Expand Up @@ -147,7 +147,6 @@ public class AdmissionDTO {
@ApiModelProperty(notes = "lock", example = "0", position = 31)
private int lock;

@NotNull
@ApiModelProperty(notes = "flag record deleted, values are 'Y' OR 'N' ", example = "N", position = 32)
private String deleted;

Expand Down
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