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4 changes: 2 additions & 2 deletions imglib2/accessibles.html
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<p>In ImgLib2, images are represented by <em>Accessibles</em>. <em>Image</em> here refers to any (partial) function from coordinates to values.</p>
<p>In the <a href="../imglib2/accessors">previous section</a> we have seen how pixel values can be manipulated using <a href="../imglib2/accessors">Accessors</a>. Accessors are obtained from <em>Accessibles</em>. For example we have used:</p>
<p>In the <a href="accessors">previous section</a> we have seen how pixel values can be manipulated using <a href="accessors">Accessors</a>. Accessors are obtained from <em>Accessibles</em>. For example we have used:</p>
<pre><code>final Cursor&lt; UnsignedByteType &gt; cursor = img.localizingCursor();</code></pre>
<p>to obtain an iterating accessor from the Accessible <code>img</code>.</p>
<p><em>Accessibles</em> represent the data itself. Pixel images, procedurally generated images, views into images (for instance sub-images), interpolated images, sparse collections of samples, the list of local intensity maxima of an image, list of nearest neighbors, <em>etc.</em>, are all examples of Accessibles.</p>
<p>The UML diagram below shows the integer part of the <em>Accessible</em> interface hierarchy. We will look at the full diagram including Accessibles for real coordinates later. <em>Accessible</em> interfaces have been highlighted.</p>
<p>{% include img src=“imglib2-accessibles-integer” align=“center” width=“775” caption=“UML for ImgLib2 integer accessible interfaces” %}</p>
<p><a href="http://javadoc.scijava.org/ImgLib2/net/imglib2/RandomAccessible.html">RandomAccessible</a> and <a href="http://javadoc.scijava.org/ImgLib2/net/imglib2/RandomAccessibleInterval.html">RandomAccessibleInterval</a> represent images that are random-accessible at integer coordinates. (Remember: an image is a - possibly partial - function from coordinates to values.) You can obtain a RandomAccess on the data using the <code>randomAccess()</code> or <code>randomAccess(Interval)</code> methods.</p>
<p>All ImgLib2 classes representing pixel images are <a href="http://javadoc.scijava.org/ImgLib2/net/imglib2/RandomAccessible.html">RandomAccessibles</a>. We already used this in <a href="../imglib2/accessors#randomaccess">a previous example</a> to obtain a <code>RandomAccess</code> on an <code>ArrayImg</code>.</p>
<p>All ImgLib2 classes representing pixel images are <a href="http://javadoc.scijava.org/ImgLib2/net/imglib2/RandomAccessible.html">RandomAccessibles</a>. We already used this in <a href="accessors#randomaccess">a previous example</a> to obtain a <code>RandomAccess</code> on an <code>ArrayImg</code>.</p>
<pre><code>final RandomAccess&lt; UnsignedByteType &gt; r = img.randomAccess();</code></pre>
<p><a href="http://javadoc.scijava.org/ImgLib2/net/imglib2/IterableInterval.html">IterableInterval</a> represents an iterable collection of samples at integer coordinates. You can obtain a <code>Cursor</code> using the <code>cursor()</code> or <code>localizingCursor()</code> methods. You can obtain the number of elements using <code>size()</code>. The first element can be obtained by <code>firstElement()</code> which is a short-cut for <code>cursor().next()</code>.</p>
<p><a href="http://javadoc.scijava.org/ImgLib2/net/imglib2/RandomAccessibleInterval.html">RandomAccessibleInterval</a> and <a href="http://javadoc.scijava.org/ImgLib2/net/imglib2/IterableInterval.html">IterableInterval</a> represent bounded images where all samples lie within an interval. Both extend <a href="http://javadoc.scijava.org/ImgLib2/net/imglib2/Interval.html">Interval</a> which defines methods to obtain the minimum, maximum, and dimensions of the interval. Dimensions refers to the extend of the interval in every dimension, and is defined as <code>maximum - minimum + 1</code>. You can obtain the maximum and minimum in a single or all dimensions. If you obtain it in all dimensions, it can be stored into a <code>long[]</code> array or a <code>Positionable</code>. (Have a look at the <a href="http://javadoc.scijava.org/ImgLib2/net/imglib2/Interval.html">Interval</a> API doc.)</p>
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