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imglib · Mar 5, 2024 · 37fd3cc · 37fd3cc
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diff --git a/.quarto/xref/176084fe b/.quarto/xref/176084fe
@@ -1 +1 @@
-{"entries":[],"headings":["contributing-guidelines","table-of-contents","governance","code-of-conduct","getting-started","making-contributions","creating-issues","working-on-issues","submitting-pull-requests","code-guidelines","testing","documentation","community","license"]}
+{"headings":["contributing-guidelines","table-of-contents","governance","code-of-conduct","getting-started","making-contributions","creating-issues","working-on-issues","submitting-pull-requests","code-guidelines","testing","documentation","community","license"],"entries":[]}
diff --git a/.quarto/xref/97d13de6 b/.quarto/xref/97d13de6
@@ -1 +1 @@
-{"headings":["contributor-covenant-code-of-conduct","our-pledge","our-standards","enforcement-responsibilities","scope","enforcement","enforcement-guidelines","correction","warning","temporary-ban","permanent-ban","attribution"],"entries":[]}
+{"entries":[],"headings":["contributor-covenant-code-of-conduct","our-pledge","our-standards","enforcement-responsibilities","scope","enforcement","enforcement-guidelines","correction","warning","temporary-ban","permanent-ban","attribution"]}
diff --git a/.quarto/xref/b1e042fe b/.quarto/xref/b1e042fe
@@ -1 +1 @@
-{"headings":["juliaset-lambda"],"entries":[]}
+{"entries":[],"headings":["juliaset-lambda"]}
diff --git a/.quarto/xref/f9cd8537 b/.quarto/xref/f9cd8537
@@ -1 +1 @@
-{"headings":["general-bigdataviwer-resources","video-lectures","tutorials-and-notebooks","references"],"entries":[]}
+{"entries":[],"headings":["general-bigdataviwer-resources","video-lectures","tutorials-and-notebooks","references"]}
diff --git a/WWW_CONTENT/BDV_logo.png b/WWW_CONTENT/BDV_logo.png
diff --git a/WWW_CONTENT/BDV_logo_cropped2.svg b/WWW_CONTENT/BDV_logo_cropped2.svg
diff --git a/WWW_CONTENT/blog_posts/2022-05-02-juliaset-lambda/2022-05-02-juliaset-lambda.html b/WWW_CONTENT/blog_posts/2022-05-02-juliaset-lambda/2022-05-02-juliaset-lambda.html
@@ -98,6 +98,12 @@
 
 
 <link rel="stylesheet" href="../../styles.css">
+<meta property="og:title" content="ImgLib2 and BigDataviewer projects - Juliaset Lambda">
+<meta property="og:description" content="">
+<meta property="og:image" content="https://imglib.github.io/imglib2-www/blog_posts/2022-05-02-juliaset-lambda/2022-05-02-juliaset-lambda_files/figure-html/cell-6-output-1.png">
+<meta property="og:site-name" content="ImgLib2 and BigDataviewer projects">
+<meta property="og:image:height" content="512">
+<meta property="og:image:width" content="512">
 </head>
 
 <body class="nav-fixed fullcontent">
@@ -117,15 +123,23 @@
 </button>
           <div class="collapse navbar-collapse" id="navbarCollapse">
             <ul class="navbar-nav navbar-nav-scroll ms-auto">
+  <li class="nav-item">
+    <a class="nav-link" href="../../Imglib2.html" rel="" target="">
+ <span class="menu-text">ImgLib2</span></a>
+  </li>  
+  <li class="nav-item">
+    <a class="nav-link" href="../../BDV.html" rel="" target="">
+ <span class="menu-text">BDV</span></a>
+  </li>  
   <li class="nav-item">
     <a class="nav-link" href="../../blog.html" rel="" target="">
  <span class="menu-text">Blog</span></a>
   </li>  
   <li class="nav-item dropdown ">
-    <a class="nav-link dropdown-toggle" href="#" id="nav-menu-learning-resources" role="button" data-bs-toggle="dropdown" aria-expanded="false" rel="" target="">
- <span class="menu-text">Learning Resources</span>
+    <a class="nav-link dropdown-toggle" href="#" id="nav-menu-resources" role="button" data-bs-toggle="dropdown" aria-expanded="false" rel="" target="">
+ <span class="menu-text">Resources</span>
     </a>
-    <ul class="dropdown-menu dropdown-menu-end" aria-labelledby="nav-menu-learning-resources">    
+    <ul class="dropdown-menu dropdown-menu-end" aria-labelledby="nav-menu-resources">    
         <li>
     <a class="dropdown-item" href="../../learning_resources/imglib2_links.html" rel="" target=""><i class="bi bi-info-square" role="img">
 </i> 
@@ -135,6 +149,16 @@
     <a class="dropdown-item" href="../../learning_resources/bigdataviewer_links.html" rel="" target=""><i class="bi bi-info-square" role="img">
 </i> 
  <span class="dropdown-text">BigDataViewer links</span></a>
+  </li>  
+        <li>
+    <a class="dropdown-item" href="https://github.com/imglib" rel="" target=""><i class="bi bi-github" role="img">
+</i> 
+ <span class="dropdown-text">ImgLib2 github</span></a>
+  </li>  
+        <li>
+    <a class="dropdown-item" href="https://github.com/bigdataviewer" rel="" target=""><i class="bi bi-github" role="img">
+</i> 
+ <span class="dropdown-text">BigDataViewer github</span></a>
   </li>  
     </ul>
   </li>
@@ -164,6 +188,11 @@
   </li>  
     </ul>
   </li>
+  <li class="nav-item compact">
+    <a class="nav-link" href="https://fosstodon.org/@imglib2" rel="" target=""><i class="bi bi-mastodon" role="img">
+</i> 
+ <span class="menu-text"></span></a>
+  </li>  
 </ul>
             <div class="quarto-navbar-tools">
 </div>
@@ -175,7 +204,7 @@
 <header id="title-block-header" class="quarto-title-block default page-columns page-full">
   <div class="quarto-title-banner page-columns page-full">
     <div class="quarto-title column-body">
-      <h1 class="title">Juliaset Lambda</h1>
+      <div class="quarto-title-block"><div><h1 class="title">Juliaset Lambda</h1><button type="button" class="btn code-tools-button" id="quarto-code-tools-source" data-quarto-source-url="https://github.com/imglib/imglib2-www/blob/main/blog_posts/2022-05-02-juliaset-lambda/2022-05-02-juliaset-lambda.ipynb"><i class="bi"></i> Code</button></div></div>
                                 <div class="quarto-categories">
                 <div class="quarto-category">imglib2</div>
                 <div class="quarto-category">lambda</div>
@@ -459,6 +488,57 @@ <h1>Juliaset Lambda</h1>
     // clear code selection
     e.clearSelection();
   });
+  const viewSource = window.document.getElementById('quarto-view-source') ||
+                     window.document.getElementById('quarto-code-tools-source');
+  if (viewSource) {
+    const sourceUrl = viewSource.getAttribute("data-quarto-source-url");
+    viewSource.addEventListener("click", function(e) {
+      if (sourceUrl) {
+        // rstudio viewer pane
+        if (/\bcapabilities=\b/.test(window.location)) {
+          window.open(sourceUrl);
+        } else {
+          window.location.href = sourceUrl;
+        }
+      } else {
+        const modal = new bootstrap.Modal(document.getElementById('quarto-embedded-source-code-modal'));
+        modal.show();
+      }
+      return false;
+    });
+  }
+  function toggleCodeHandler(show) {
+    return function(e) {
+      const detailsSrc = window.document.querySelectorAll(".cell > details > .sourceCode");
+      for (let i=0; i<detailsSrc.length; i++) {
+        const details = detailsSrc[i].parentElement;
+        if (show) {
+          details.open = true;
+        } else {
+          details.removeAttribute("open");
+        }
+      }
+      const cellCodeDivs = window.document.querySelectorAll(".cell > .sourceCode");
+      const fromCls = show ? "hidden" : "unhidden";
+      const toCls = show ? "unhidden" : "hidden";
+      for (let i=0; i<cellCodeDivs.length; i++) {
+        const codeDiv = cellCodeDivs[i];
+        if (codeDiv.classList.contains(fromCls)) {
+          codeDiv.classList.remove(fromCls);
+          codeDiv.classList.add(toCls);
+        } 
+      }
+      return false;
+    }
+  }
+  const hideAllCode = window.document.getElementById("quarto-hide-all-code");
+  if (hideAllCode) {
+    hideAllCode.addEventListener("click", toggleCodeHandler(false));
+  }
+  const showAllCode = window.document.getElementById("quarto-show-all-code");
+  if (showAllCode) {
+    showAllCode.addEventListener("click", toggleCodeHandler(true));
+  }
   function tippyHover(el, contentFn) {
     const config = {
       allowHTML: true,

diff --git a/WWW_CONTENT/blog_posts/2022-05-02-juliaset-lambda/2022-05-02-juliaset-lambda.ipynb b/WWW_CONTENT/blog_posts/2022-05-02-juliaset-lambda/2022-05-02-juliaset-lambda.ipynb
diff --git a/...og_posts/2022-06-05-setup-ijava-jupyter-kernel/2022-06-05-setup-ijava-jupyter-kernel.html b/...og_posts/2022-06-05-setup-ijava-jupyter-kernel/2022-06-05-setup-ijava-jupyter-kernel.html
@@ -98,6 +98,9 @@
 
 
 <link rel="stylesheet" href="../../styles.css">
+<meta property="og:title" content="ImgLib2 and BigDataviewer projects - Setup the IJava jupyter kernel">
+<meta property="og:description" content="">
+<meta property="og:site-name" content="ImgLib2 and BigDataviewer projects">
 </head>
 
 <body class="nav-fixed fullcontent">
@@ -117,15 +120,23 @@
 </button>
           <div class="collapse navbar-collapse" id="navbarCollapse">
             <ul class="navbar-nav navbar-nav-scroll ms-auto">
+  <li class="nav-item">
+    <a class="nav-link" href="../../Imglib2.html" rel="" target="">
+ <span class="menu-text">ImgLib2</span></a>
+  </li>  
+  <li class="nav-item">
+    <a class="nav-link" href="../../BDV.html" rel="" target="">
+ <span class="menu-text">BDV</span></a>
+  </li>  
   <li class="nav-item">
     <a class="nav-link" href="../../blog.html" rel="" target="">
  <span class="menu-text">Blog</span></a>
   </li>  
   <li class="nav-item dropdown ">
-    <a class="nav-link dropdown-toggle" href="#" id="nav-menu-learning-resources" role="button" data-bs-toggle="dropdown" aria-expanded="false" rel="" target="">
- <span class="menu-text">Learning Resources</span>
+    <a class="nav-link dropdown-toggle" href="#" id="nav-menu-resources" role="button" data-bs-toggle="dropdown" aria-expanded="false" rel="" target="">
+ <span class="menu-text">Resources</span>
     </a>
-    <ul class="dropdown-menu dropdown-menu-end" aria-labelledby="nav-menu-learning-resources">    
+    <ul class="dropdown-menu dropdown-menu-end" aria-labelledby="nav-menu-resources">    
         <li>
     <a class="dropdown-item" href="../../learning_resources/imglib2_links.html" rel="" target=""><i class="bi bi-info-square" role="img">
 </i> 
@@ -135,6 +146,16 @@
     <a class="dropdown-item" href="../../learning_resources/bigdataviewer_links.html" rel="" target=""><i class="bi bi-info-square" role="img">
 </i> 
  <span class="dropdown-text">BigDataViewer links</span></a>
+  </li>  
+        <li>
+    <a class="dropdown-item" href="https://github.com/imglib" rel="" target=""><i class="bi bi-github" role="img">
+</i> 
+ <span class="dropdown-text">ImgLib2 github</span></a>
+  </li>  
+        <li>
+    <a class="dropdown-item" href="https://github.com/bigdataviewer" rel="" target=""><i class="bi bi-github" role="img">
+</i> 
+ <span class="dropdown-text">BigDataViewer github</span></a>
   </li>  
     </ul>
   </li>
@@ -164,6 +185,11 @@
   </li>  
     </ul>
   </li>
+  <li class="nav-item compact">
+    <a class="nav-link" href="https://fosstodon.org/@imglib2" rel="" target=""><i class="bi bi-mastodon" role="img">
+</i> 
+ <span class="menu-text"></span></a>
+  </li>  
 </ul>
             <div class="quarto-navbar-tools">
 </div>
@@ -175,7 +201,7 @@
 <header id="title-block-header" class="quarto-title-block default page-columns page-full">
   <div class="quarto-title-banner page-columns page-full">
     <div class="quarto-title column-body">
-      <h1 class="title">Setup the IJava jupyter kernel</h1>
+      <div class="quarto-title-block"><div><h1 class="title">Setup the IJava jupyter kernel</h1><button type="button" class="btn code-tools-button" id="quarto-code-tools-source" data-quarto-source-url="https://github.com/imglib/imglib2-www/blob/main/blog_posts/2022-06-05-setup-ijava-jupyter-kernel/2022-06-05-setup-ijava-jupyter-kernel.qmd"><i class="bi"></i> Code</button></div></div>
                                 <div class="quarto-categories">
                 <div class="quarto-category">jupyter</div>
                 <div class="quarto-category">ijava</div>
@@ -355,6 +381,57 @@ <h1 class="title">Setup the IJava jupyter kernel</h1>
     // clear code selection
     e.clearSelection();
   });
+  const viewSource = window.document.getElementById('quarto-view-source') ||
+                     window.document.getElementById('quarto-code-tools-source');
+  if (viewSource) {
+    const sourceUrl = viewSource.getAttribute("data-quarto-source-url");
+    viewSource.addEventListener("click", function(e) {
+      if (sourceUrl) {
+        // rstudio viewer pane
+        if (/\bcapabilities=\b/.test(window.location)) {
+          window.open(sourceUrl);
+        } else {
+          window.location.href = sourceUrl;
+        }
+      } else {
+        const modal = new bootstrap.Modal(document.getElementById('quarto-embedded-source-code-modal'));
+        modal.show();
+      }
+      return false;
+    });
+  }
+  function toggleCodeHandler(show) {
+    return function(e) {
+      const detailsSrc = window.document.querySelectorAll(".cell > details > .sourceCode");
+      for (let i=0; i<detailsSrc.length; i++) {
+        const details = detailsSrc[i].parentElement;
+        if (show) {
+          details.open = true;
+        } else {
+          details.removeAttribute("open");
+        }
+      }
+      const cellCodeDivs = window.document.querySelectorAll(".cell > .sourceCode");
+      const fromCls = show ? "hidden" : "unhidden";
+      const toCls = show ? "unhidden" : "hidden";
+      for (let i=0; i<cellCodeDivs.length; i++) {
+        const codeDiv = cellCodeDivs[i];
+        if (codeDiv.classList.contains(fromCls)) {
+          codeDiv.classList.remove(fromCls);
+          codeDiv.classList.add(toCls);
+        } 
+      }
+      return false;
+    }
+  }
+  const hideAllCode = window.document.getElementById("quarto-hide-all-code");
+  if (hideAllCode) {
+    hideAllCode.addEventListener("click", toggleCodeHandler(false));
+  }
+  const showAllCode = window.document.getElementById("quarto-show-all-code");
+  if (showAllCode) {
+    showAllCode.addEventListener("click", toggleCodeHandler(true));
+  }
   function tippyHover(el, contentFn) {
     const config = {
       allowHTML: true,
Original file line number	Diff line number	Diff line change
		@@ -1 +1 @@
		{"entries":[],"headings":["contributing-guidelines","table-of-contents","governance","code-of-conduct","getting-started","making-contributions","creating-issues","working-on-issues","submitting-pull-requests","code-guidelines","testing","documentation","community","license"]}
		{"headings":["contributing-guidelines","table-of-contents","governance","code-of-conduct","getting-started","making-contributions","creating-issues","working-on-issues","submitting-pull-requests","code-guidelines","testing","documentation","community","license"],"entries":[]}
Original file line number	Diff line number	Diff line change
		@@ -1 +1 @@
		{"headings":["contributor-covenant-code-of-conduct","our-pledge","our-standards","enforcement-responsibilities","scope","enforcement","enforcement-guidelines","correction","warning","temporary-ban","permanent-ban","attribution"],"entries":[]}
		{"entries":[],"headings":["contributor-covenant-code-of-conduct","our-pledge","our-standards","enforcement-responsibilities","scope","enforcement","enforcement-guidelines","correction","warning","temporary-ban","permanent-ban","attribution"]}
Original file line number	Diff line number	Diff line change
		@@ -1 +1 @@
		{"headings":["juliaset-lambda"],"entries":[]}
		{"entries":[],"headings":["juliaset-lambda"]}
Original file line number	Diff line number	Diff line change
		@@ -1 +1 @@
		{"headings":["general-bigdataviwer-resources","video-lectures","tutorials-and-notebooks","references"],"entries":[]}
		{"entries":[],"headings":["general-bigdataviwer-resources","video-lectures","tutorials-and-notebooks","references"]}