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@igvteam

igvteam

Github repository for the Integrative Genomics Viewer (IGV) team.

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  1. igv.js igv.js Public

    Embeddable genomic visualization component based on the Integrative Genomics Viewer

    JavaScript 636 224

  2. igv-webapp igv-webapp Public

    IGV Web App

    JavaScript 114 41

  3. igv igv Public

    Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

    Java 627 378

  4. igv-reports igv-reports Public

    Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.

    Python 336 50

  5. igv-notebook igv-notebook Public

    Module for embedding igv.js in an IPython notebook

    JavaScript 59 13

Repositories

Showing 10 of 35 repositories
  • igv.js Public

    Embeddable genomic visualization component based on the Integrative Genomics Viewer

    igvteam/igv.js’s past year of commit activity
    JavaScript 636 MIT 224 66 1 Updated Aug 2, 2024
  • igv-webapp Public

    IGV Web App

    igvteam/igv-webapp’s past year of commit activity
    JavaScript 114 MIT 41 9 0 Updated Aug 1, 2024
  • igv-docs-website Public

    Markdown-based documentation website - IGV desktop application

    igvteam/igv-docs-website’s past year of commit activity
    JavaScript 4 1 0 0 Updated Jul 30, 2024
  • igv Public

    Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

    igvteam/igv’s past year of commit activity
    Java 627 MIT 378 133 0 Updated Jul 30, 2024
  • spacewalk Public

    Spacewalk is an application for displaying and interacting with super-resolution chromatin tracing data in 3D. SpaceWalk includes igv.js and juicebox.js instances for rapid and intuitive visual comparison and interaction between 3D data and 1D genomic data.

    igvteam/spacewalk’s past year of commit activity
    JavaScript 10 MIT 1 1 0 Updated Jul 26, 2024
  • data-modal Public

    A data resource browser and selector based on DataTables. Used by igv applications for selecting files from ENCODE and other data resources.

    igvteam/data-modal’s past year of commit activity
    JavaScript 2 MIT 2 0 0 Updated Jul 20, 2024
  • juicebox-web Public
    igvteam/juicebox-web’s past year of commit activity
    JavaScript 2 0 3 0 Updated Jul 19, 2024
  • juicebox.js Public

    HiC contact matrix visualization

    igvteam/juicebox.js’s past year of commit activity
    JavaScript 19 MIT 13 21 0 Updated Jul 19, 2024
  • igv-utils Public
    igvteam/igv-utils’s past year of commit activity
    JavaScript 5 5 2 0 Updated Jul 17, 2024
  • hic-straw Public

    Command line and web utilities for reading .hic contact matrix files

    igvteam/hic-straw’s past year of commit activity
    JavaScript 8 MIT 4 0 0 Updated Jul 9, 2024
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